9Y4G
Structure of tuco-tuco ribosome (rotated, tRNAs, and mRNA)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (Ag) | Guanine nucleotide-binding protein subunit beta-2-like 1 | polymer | 313 | 34669.1 | 1 | Ctenomyidae | ||
| 2 | B (AU) | 40S ribosomal protein S20 | polymer | 104 | 11765.9 | 1 | Ctenomyidae | ||
| 3 | C (AK) | 40S ribosomal protein S10 | polymer | 98 | 11774.0 | 1 | Ctenomyidae | ||
| 4 | D (AM) | 40S ribosomal protein S12 | polymer | 124 | 13776.0 | 1 | Ctenomyidae | ||
| 5 | E (AS) | 40S ribosomal protein S18 | polymer | 137 | 16170.8 | 1 | Ctenomyidae | ||
| 6 | F (Ad) | 40S ribosomal protein S29 | polymer | 53 | 6364.4 | 1 | Ctenomyidae | ||
| 7 | G (AR) | 40S ribosomal protein S17 | polymer | 126 | 14579.0 | 1 | Ctenomyidae | ||
| 8 | H (AP) | 40S ribosomal protein S15 | polymer | 127 | 15179.0 | 1 | Ctenomyidae | ||
| 9 | I (AT) | 40S ribosomal protein S19 | polymer | 141 | 15668.0 | 1 | Ctenomyidae | ||
| 10 | J (AZ) | 40S ribosomal protein S25 | polymer | 75 | 8526.1 | 1 | Ctenomyidae | ||
| 11 | K (Ac) | 40S ribosomal protein S28 | polymer | 64 | 7263.4 | 1 | Ctenomyidae | ||
| 12 | L (AD) | 40S ribosomal protein S3 | polymer | 227 | 25172.6 | 1 | Ctenomyidae | ||
| 13 | M (Af) | 40S ribosomal protein S27a | polymer | 71 | 8358.9 | 1 | Ctenomyidae | ||
| 14 | N (AF) | 40S ribosomal protein S5 | polymer | 191 | 21525.9 | 1 | Ctenomyidae | ||
| 15 | O (AQ) | 40S ribosomal protein S16 | polymer | 141 | 15975.8 | 1 | Ctenomyidae | ||
| 16 | P (B2) | 18S ribosomal RNA | polymer | 1796 | 579439.0 | 1 | Ctenomyidae | ||
| 17 | Q (AO) | 40S ribosomal protein S14 | polymer | 136 | 14544.7 | 1 | Ctenomyidae | ||
| 18 | R (AX) | 40S ribosomal protein S23 | polymer | 142 | 15757.6 | 1 | Ctenomyidae | ||
| 19 | S (AN) | 40S ribosomal protein S13 | polymer | 150 | 17128.2 | 1 | Ctenomyidae | ||
| 20 | T (AL) | 40S ribosomal protein S11 | polymer | 158 | 18468.8 | 1 | Ctenomyidae | ||
| 21 | U (AB) | 40S ribosomal protein S3a | polymer | 215 | 25017.5 | 1 | Ctenomyidae | ||
| 22 | V (AA) | 40S ribosomal protein SA | polymer | 208 | 23360.8 | 1 | Ctenomyidae | ||
| 23 | W (AV) | 40S ribosomal protein S21 | polymer | 82 | 8977.2 | 1 | Ctenomyidae | ||
| 24 | X (AY) | 40S ribosomal protein S24 | polymer | 126 | 14604.3 | 1 | Ctenomyidae | ||
| 25 | Y (Aa) | 40S ribosomal protein S26 | polymer | 107 | 12110.3 | 1 | Ctenomyidae | ||
| 26 | Z (Ab) | 40S ribosomal protein S27 | polymer | 84 | 9480.2 | 1 | Ctenomyidae | ||
| 27 | AA (Ae) | 40S ribosomal protein S30 | polymer | 59 | 6668.9 | 1 | Ctenomyidae | ||
| 28 | BA (AJ) | 40S ribosomal protein S9 | polymer | 182 | 21266.2 | 1 | Ctenomyidae | ||
| 29 | CA (AE) | 40S ribosomal protein S4, X isoform | polymer | 263 | 29654.9 | 1 | Ctenomyidae | ||
| 30 | DA (AC) | 40S ribosomal protein S2 | polymer | 226 | 24961.4 | 1 | Ctenomyidae | ||
| 31 | EA (AG) | 40S ribosomal protein S6 | polymer | 237 | 27471.5 | 1 | Ctenomyidae | ||
| 32 | FA (AH) | 40S ribosomal protein S7 | polymer | 190 | 21716.4 | 1 | Ctenomyidae | ||
| 33 | GA (AW) | 40S ribosomal protein S15a | polymer | 129 | 14734.4 | 1 | Ctenomyidae | ||
| 34 | HA (AI) | 40S ribosomal protein S8 | polymer | 206 | 24003.0 | 1 | Ctenomyidae | ||
| 35 | IA (CR) | 60S ribosomal protein L19 | polymer | 189 | 22659.3 | 1 | Ctenomyidae | ||
| 36 | JA (CW) | 60S ribosomal protein L24 | polymer | 124 | 14477.0 | 1 | Ctenomyidae | ||
| 37 | KA (Cz) | 60S ribosomal protein L10a | polymer | 217 | 24879.4 | 1 | Ctenomyidae | ||
| 38 | LA (CO) | 60S ribosomal protein L13a | polymer | 202 | 23502.2 | 1 | Ctenomyidae | ||
| 39 | MA (CL) | 60S ribosomal protein L13 | polymer | 210 | 24190.5 | 1 | Ctenomyidae | ||
| 40 | NA (CV) | 60S ribosomal protein L23 | polymer | 133 | 14116.6 | 1 | Ctenomyidae | ||
| 41 | OA (CM) | 60S ribosomal protein L14 | polymer | 139 | 16254.4 | 1 | Ctenomyidae | ||
| 42 | PA (Ca) | 60S ribosomal protein L27a | polymer | 147 | 16473.3 | 1 | Ctenomyidae | ||
| 43 | QA (CN) | 60S ribosomal protein L15 | polymer | 203 | 24076.1 | 1 | Ctenomyidae | ||
| 44 | RA (CI) | 60S ribosomal protein L10-like | polymer | 213 | 24439.8 | 1 | Ctenomyidae | ||
| 45 | SA (CD) | 60S ribosomal protein L5 | polymer | 289 | 33535.6 | 1 | Ctenomyidae | ||
| 46 | TA (CQ) | 60S ribosomal protein L18 | polymer | 188 | 21687.7 | 1 | Ctenomyidae | ||
| 47 | UA (CA) | 60S ribosomal protein L8 | polymer | 255 | 27843.6 | 1 | Ctenomyidae | ||
| 48 | VA (CS) | 60S ribosomal protein L18a | polymer | 175 | 20677.3 | 1 | Ctenomyidae | ||
| 49 | WA (CT) | 60S ribosomal protein L21 | polymer | 159 | 18478.8 | 1 | Ctenomyidae | ||
| 50 | XA (CP) | 60S ribosomal protein L17 | polymer | 152 | 17628.5 | 1 | Ctenomyidae | ||
| 51 | YA (CU) | 60S ribosomal protein L22 | polymer | 112 | 13098.9 | 1 | Ctenomyidae | ||
| 52 | ZA (CX) | 60S ribosomal protein L23a | polymer | 121 | 14114.7 | 1 | Ctenomyidae | ||
| 53 | AB (CY) | 60S ribosomal protein L26 | polymer | 133 | 15760.6 | 1 | Ctenomyidae | ||
| 54 | BB (CZ) | 60S ribosomal protein L27 | polymer | 135 | 15704.6 | 1 | Ctenomyidae | ||
| 55 | CB (Cr) | 60S ribosomal protein L28 | polymer | 137 | 15784.6 | 1 | Ctenomyidae | ||
| 56 | DB (Ch) | 60S ribosomal protein L35 | polymer | 123 | 14593.6 | 1 | Ctenomyidae | ||
| 57 | EB (Cb) | 60S ribosomal protein L29 | polymer | 78 | 9077.8 | 1 | Ctenomyidae | ||
| 58 | FB (CB) | 60S ribosomal protein L3 | polymer | 397 | 45564.4 | 1 | Ctenomyidae | ||
| 59 | GB (CF) | 60S ribosomal protein L7 | polymer | 229 | 27163.5 | 1 | Ctenomyidae | ||
| 60 | HB (Cd) | 60S ribosomal protein L31 | polymer | 113 | 13250.4 | 1 | Ctenomyidae | ||
| 61 | IB (Ce) | 60S ribosomal protein L32 | polymer | 133 | 15655.7 | 1 | Ctenomyidae | ||
| 62 | JB (Cf) | 60S ribosomal protein L35a | polymer | 109 | 12433.5 | 1 | Ctenomyidae | ||
| 63 | KB (Cg) | 60S ribosomal protein L34 | polymer | 114 | 12994.6 | 1 | Ctenomyidae | ||
| 64 | LB (Ci) | 60S ribosomal protein L36 | polymer | 103 | 12046.6 | 1 | Ctenomyidae | ||
| 65 | MB (Cj) | 60S ribosomal protein L37 | polymer | 90 | 10489.4 | 1 | Ctenomyidae | ||
| 66 | NB (Ck) | 60S ribosomal protein L38 | polymer | 69 | 8107.8 | 1 | Ctenomyidae | ||
| 67 | OB (Cl) | 60S ribosomal protein L39 | polymer | 50 | 6295.6 | 1 | Ctenomyidae | ||
| 68 | PB (CC) | 60S ribosomal protein L4 | polymer | 368 | 41683.1 | 1 | Ctenomyidae | ||
| 69 | QB (Cm) | 60S ribosomal protein L40 | polymer | 52 | 6199.6 | 1 | Ctenomyidae | ||
| 70 | RB (Cn) | 60S ribosomal protein L41 | polymer | 25 | 3473.5 | 1 | Ctenomyidae | ||
| 71 | SB (Cp) | 60S ribosomal protein L37a | polymer | 90 | 10097.1 | 1 | Ctenomyidae | ||
| 72 | TB (Co) | 60S ribosomal protein L36a | polymer | 105 | 12345.8 | 1 | Ctenomyidae | ||
| 73 | UB (CJ) | 60S ribosomal protein L11 | polymer | 168 | 19213.3 | 1 | Ctenomyidae | ||
| 74 | VB (CH) | 60S ribosomal protein L9 | polymer | 191 | 21770.4 | 1 | Ctenomyidae | ||
| 75 | WB (CE) | 60S ribosomal protein L6 | polymer | 262 | 30020.9 | 1 | Ctenomyidae | ||
| 76 | XB (CG) | 60S ribosomal protein L7a | polymer | 246 | 28039.2 | 1 | Ctenomyidae | ||
| 77 | YB (A5) | LSU-alpha rRNA | polymer | 1778 | 575951.8 | 1 | Ctenomyidae | ||
| 78 | ZB (A7) | 5S ribosomal RNA | polymer | 121 | 38998.1 | 1 | Ctenomyidae | ||
| 79 | AC (A8) | 5.8S rRNA (157-MER) | polymer | 157 | 50449.8 | 1 | Ctenomyidae | ||
| 80 | BC (Cc) | tRNA (78-MER) | polymer | 77 | 24801.8 | 1 | Ctenomyidae | ||
| 81 | CC (Bb) | tRNA (77-MER) | polymer | 76 | 24743.8 | 1 | Ctenomyidae | ||
| 82 | DC (Dd) | RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U*(MG))-3') | polymer | 13 | 3935.2 | 1 | Ctenomyidae | ||
| 83 | EC (A6) | LSU-beta rRNA (2108-MER) | polymer | 2108 | 682418.1 | 1 | Ctenomyidae | ||
| 84 | FC, GC, HC (Cc, Bb, Dd) | MAGNESIUM ION | non-polymer | 24.3 | 3 | Chemie (MG) | |||
| 85 | IC, JC, KC, LC, MC (B2, Cc, Bb, Dd, A6) | water | water | 18.0 | 15 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 83 |
| Total formula weight | 3317331.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 72.9 | |
| All* | Total formula weight | 3317404.4 |
