9XJW
Cryo-EM structure of GPR119 in complex with partial agonist AS1268574 and Gs protein
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Guanine nucleotide-binding protein G(s) subunit alpha isoforms short | polymer | 394 | 45683.4 | 1 | UniProt (P63092) Pfam (PF00503) | Homo sapiens (human) | Adenylate cyclase-stimulating G alpha protein |
| 2 | B (B) | Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 | polymer | 351 | 38744.4 | 1 | UniProt (P62873) Pfam (PF25391) | Homo sapiens (human) | Transducin beta chain 1 |
| 3 | C (C) | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 | polymer | 71 | 7861.1 | 1 | UniProt (P59768) Pfam (PF00631) | Homo sapiens (human) | G gamma-I |
| 4 | D (N) | Nb35 | polymer | 138 | 15140.7 | 1 | Lama glama | ||
| 5 | E (R) | Glucose-dependent insulinotropic receptor | polymer | 335 | 36936.7 | 1 | UniProt (Q8TDV5) Pfam (PF00001) | Homo sapiens (human) | G-protein coupled receptor 119 |
| 6 | F (R) | 2-[[2-(4-bromophenyl)-6-methyl-pyrimidin-4-yl]amino]ethanol | non-polymer | 308.2 | 1 | Chemie (A1E0J) |
Sequence modifications
A: 1 - 394 (UniProt: P63092)
B: 13 - 351 (UniProt: P62873)
R: 1 - 335 (UniProt: Q8TDV5)
| PDB | External Database | Details |
|---|---|---|
| Asn 54 | Ser 54 | conflict |
| Ala 226 | Gly 226 | conflict |
| Ala 268 | Glu 268 | conflict |
| Lys 271 | Asn 271 | conflict |
| Asp 274 | Lys 274 | conflict |
| Lys 280 | Arg 280 | conflict |
| Asp 284 | Thr 284 | conflict |
| Thr 285 | Ile 285 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| His 2 | - | expression tag |
| His 3 | - | expression tag |
| His 4 | - | expression tag |
| His 5 | - | expression tag |
| His 6 | - | expression tag |
| His 7 | - | expression tag |
| Gly 8 | - | expression tag |
| Ser 9 | - | expression tag |
| Leu 10 | - | expression tag |
| Leu 11 | - | expression tag |
| Gln 12 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Cys 237 | Ser 237 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 144366.4 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 308.2 | |
| All* | Total formula weight | 144674.6 |
