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9XC5

Crystal structure of PDE5A in complex with a flavonoid glycoside

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
cGMP-specific 3',5'-cyclic phosphodiesterasepolymer32637789.51UniProt (O76074)Homo sapiens (human)cGMP-binding cGMP-specific phosphodiesterase,CGB-PDE
2B
(D)
alpha-L-rhamnopyranose-(1-2)-alpha-L-rhamnopyranose-(1-6)-3,5,7-trihydroxy-2-(4-methoxyphenyl)-8-(3-methylbutyl)-4H-chromen-4-onebranched662.71In PDB
3C
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
PubChem (753)
4D
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
PubChem (32051)
5E
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
6F
(A)
waterwater18.024Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight37789.5
BranchedNumber of molecules1
Total formula weight662.7
Non-Polymers*Number of molecules3
Total formula weight181.8
All*Total formula weight38634.0
*Water molecules are not included.

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PDB entries from 2026-10-21

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