9WJD
Crystal structure of rhesus macaque MHC class I molecule Mamu-B*05104 complexed with C14-Gly1-Gly2-Ile3-Ile4 lipopeptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | B protein | polymer | 276 | 31893.1 | 1 | UniProt (B2ZHY7) | Macaca mulatta (Rhesus monkey) | CDS,MHC class I antigen,MHC-class I protein |
| 2 | B (B) | Beta-2-microglobulin | polymer | 100 | 11819.2 | 1 | UniProt (P61769) Pfam (PF07654) | Homo sapiens (human) | hB2m |
| 3 | C (C) | 4-mer Lipopeptide | polymer | 4 | 358.4 | 1 | synthetic construct | ||
| 4 | AA, BA, CA, D, DA... (B, A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 25 | Chemie (EDO) | |||
| 5 | FA, W (B, A) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) PubChem (923) | |||
| 6 | X, Y (A) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) PubChem (32051) | |||
| 7 | GA (C) | MYRISTIC ACID | non-polymer | 228.4 | 1 | Chemie (MYR) PubChem (11005) | |||
| 8 | HA, IA, JA (A, B, C) | water | water | 18.0 | 209 | Chemie (HOH) |
Sequence modifications
A: 0 - 275 (UniProt: B2ZHY7)
| PDB | External Database | Details |
|---|---|---|
| Glu 128 | Arg 149 | conflict |
| Glu 177 | Lys 198 | conflict |
| Glu 223 | Asp 244 | conflict |
| Glu 264 | Lys 285 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 44070.7 | |
| Non-Polymers* | Number of molecules | 30 |
| Total formula weight | 1956.9 | |
| All* | Total formula weight | 46027.6 |
