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9WED

Plasmodium vivax aspartyl-tRNA synthetase in complex with AMP, Asp-AMP, Partially occupied ASP, Mg ion and Butanetriol

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
aspartate--tRNA ligasepolymer53662128.82UniProt (A0A1G4H6Y1)Plasmodium vivax (malaria parasite P. vivax)Aspartyl-tRNA synthetase
2C
(A)
ADENOSINE MONOPHOSPHATEnon-polymer347.21Chemie (AMP)
PubChem (6083)
3D
(A)
ASPARTIC ACIDnon-polymer133.11Chemie (ASP)
4E, F, G, M, N...
(A, B)
CHLORIDE IONnon-polymer35.56Chemie (CL)
PubChem (312)
5H, I, J, P, Q
(A, B)
(2~{S})-butane-1,2,4-triolnon-polymer106.15Chemie (0V1)
PubChem (640997)
6K
(B)
ASPARTYL-ADENOSINE-5'-MONOPHOSPHATEnon-polymer462.31Chemie (AMO)
7L
(B)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
PubChem (888)
8R, S
(A, B)
waterwater18.0352Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight124257.6
Non-Polymers*Number of molecules15
Total formula weight1710.3
All*Total formula weight125967.9
*Water molecules are not included.

259015

PDB entries from 2026-09-02

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