9WCY

Cryo-EM structure of the Mycobacterium abscessus cytochrome bcc:aa3 supercomplex in the presence of ND-011458

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, I (G, b)	Prokaryotic respiratory supercomplex associate factor 1	polymer	99	10679.5	2		Mycobacteroides abscessus
2	B, D (I, L)	Cytochrome c oxidase subunit 1	polymer	564	62692.2	2	UniProt (B1MDZ6)	Mycobacteroides abscessus
3	C, N (J, h)	Cytochrome c oxidase subunit CtaJ	polymer	86	9157.4	2	UniProt (B1MMU1)	Mycobacteroides abscessus
4	E, U (U, o)	Cytochrome bc1 complex cytochrome c subunit	polymer	295	31176.3	2	UniProt (B1MNZ9)	Mycobacteroides abscessus
5	F, V (V, p)	Cytochrome bc1 complex Rieske iron-sulfur subunit	polymer	391	43008.3	2	UniProt (B1MNZ8)	Mycobacteroides abscessus	Cytochrome bc1 reductase complex subunit QcrA,Rieske iron-sulfur protein
6	G, H (X, a)	Superoxide dismutase [Cu-Zn]	polymer	238	23842.4	2	UniProt (B1MIN6)	Mycobacteroides abscessus
7	J, K (d, e)	cytochrome-c oxidase	polymer	349	38750.3	2	UniProt (B1MNZ2)	Mycobacteroides abscessus	Cytochrome aa3 subunit 2
8	L, M (f, g)	Probable cytochrome c oxidase subunit 3	polymer	206	22538.1	2	UniProt (B1MP00)	Mycobacteroides abscessus	Cytochrome aa3 subunit 3,Cytochrome c oxidase polypeptide III
9	O, P (i, j)	Cytochrome bc1 complex cytochrome b subunit	polymer	546	60461.3	2	UniProt (B1MNZ7)	Mycobacteroides abscessus	Cytochrome bc1 reductase complex subunit QcrB,Ubiquinol--cytochrome c reductase cytochrome b subunit
10	Q, R (k, l)	DUF5130 domain-containing protein	polymer	175	18192.5	2	UniProt (B1MMU2)	Mycobacteroides abscessus
11	S, T (m, n)	Cytochrome c oxidase polypeptide 4	polymer	139	15068.4	2	UniProt (B1MNZ3)	Mycobacteroides abscessus	Cytochrome aa3 subunit 4,Cytochrome c oxidase polypeptide IV
12	W, X (q, r)	Lipoprotein lpqE	polymer	227	23241.8	2	UniProt (B1MGY1)	Mycobacteroides abscessus
13	AB, DA, EA, EC, JB... (b, I, j, i, p...)	CARDIOLIPIN	non-polymer		1464.0	18	Chemie (CDL)
14	BB, GB, HA, JA, KA... (b, f, I, L, G)	(2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate	non-polymer		718.0	6	Chemie (9Y0)
15	AA, BA, LA, MA (I, L)	HEME-A	non-polymer		852.8	4	Chemie (HEA)
16	CA, CB, DB, EB, FA... (I, d, e, L)	COPPER (II) ION	non-polymer		63.5	8	Chemie (CU) PubChem (27099)
17	GA, RA (I, L)	OXYGEN MOLECULE	non-polymer		32.0	2	Chemie (OXY) PubChem (977)
18	CC, IA, PC (j, I, q)	PALMITIC ACID	non-polymer		256.4	3	Chemie (PLM) PubChem (985)
19	HB, JC, LC, OC, SA... (i, o, p, L, j...)	(2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate	non-polymer		853.1	7	Chemie (9YF)
20	HC, IC, TA, UA (o, U)	HEME C	non-polymer		618.5	4	Chemie (HEC)
21	AC, BC, FC, GC, KC... (j, m, n, o, i...)	MENAQUINONE-9	non-polymer		785.2	8	Chemie (MQ9) PubChem (5288844)
22	MC, XA (p, V)	FE2/S2 (INORGANIC) CLUSTER	non-polymer		175.8	2	Chemie (FES)
23	IB, VB (i, j)	6-chloranyl-2-methyl-~{N}-[[4-[4-[4-(trifluoromethyloxy)phenyl]piperidin-1-yl]phenyl]methyl]imidazo[1,2-a]pyridine-3-carboxamide	non-polymer		543.0	2	Chemie (A1MBF)
24	KB, LB, WB, XB (i, j)	PROTOPORPHYRIN IX CONTAINING FE	non-polymer		616.5	4	Chemie (HEM)
25	DC, QC, RB, RC (j, q, i, r)	(2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate	non-polymer		595.0	4	Chemie (9XX) PubChem (137348873)
26	AD, BD, CD, DD, SC... (m, n, o, p, I...)	water	water		18.0	74	Chemie (HOH)

Contents of the asymmetric unit

Polymers	Number of chains	24
	Total formula weight	717616.8
Non-Polymers*	Number of molecules	72
	Total formula weight	56424.9
All*	Total formula weight	774041.7

*Water molecules are not included.