9WCX
Cryo-EM structure of the Mycobacterium abscessus cytochrome bcc:aa3 supercomplex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, I (G, b) | Prokaryotic respiratory supercomplex associate factor 1 | polymer | 99 | 10679.5 | 2 | Mycobacteroides abscessus | ||
| 2 | B, D (I, L) | Cytochrome c oxidase subunit 1 | polymer | 564 | 62692.2 | 2 | UniProt (B1MDZ6) | Mycobacteroides abscessus | |
| 3 | C, N (J, h) | Cytochrome c oxidase subunit CtaJ | polymer | 86 | 9157.4 | 2 | UniProt (B1MMU1) | Mycobacteroides abscessus | |
| 4 | E, U (U, o) | Cytochrome bc1 complex cytochrome c subunit | polymer | 295 | 31176.3 | 2 | UniProt (B1MNZ9) | Mycobacteroides abscessus | |
| 5 | F, V (V, p) | Cytochrome bc1 complex Rieske iron-sulfur subunit | polymer | 391 | 43008.3 | 2 | UniProt (B1MNZ8) | Mycobacteroides abscessus | Cytochrome bc1 reductase complex subunit QcrA,Rieske iron-sulfur protein |
| 6 | G, H (X, a) | Superoxide dismutase [Cu-Zn] | polymer | 238 | 23842.4 | 2 | UniProt (B1MIN6) | Mycobacteroides abscessus | |
| 7 | J, K (d, e) | cytochrome-c oxidase | polymer | 349 | 38750.3 | 2 | UniProt (B1MNZ2) | Mycobacteroides abscessus | Cytochrome aa3 subunit 2 |
| 8 | L, M (f, g) | Probable cytochrome c oxidase subunit 3 | polymer | 206 | 22538.1 | 2 | UniProt (B1MP00) | Mycobacteroides abscessus | Cytochrome aa3 subunit 3,Cytochrome c oxidase polypeptide III |
| 9 | O, P (i, j) | Cytochrome bc1 complex cytochrome b subunit | polymer | 546 | 60461.3 | 2 | UniProt (B1MNZ7) | Mycobacteroides abscessus | Cytochrome bc1 reductase complex subunit QcrB,Ubiquinol--cytochrome c reductase cytochrome b subunit |
| 10 | Q, R (k, l) | DUF5130 domain-containing protein | polymer | 175 | 18192.5 | 2 | UniProt (B1MMU2) | Mycobacteroides abscessus | |
| 11 | S, T (m, n) | Cytochrome c oxidase polypeptide 4 | polymer | 139 | 15068.4 | 2 | UniProt (B1MNZ3) | Mycobacteroides abscessus | Cytochrome aa3 subunit 4,Cytochrome c oxidase polypeptide IV |
| 12 | W, X (q, r) | Lipoprotein lpqE | polymer | 227 | 23241.8 | 2 | UniProt (B1MGY1) | Mycobacteroides abscessus | |
| 13 | DC, SB, WA, Y (j, i, b, G) | (2S)-1-(hexadecanoyloxy)propan-2-yl (10S)-10-methyloctadecanoate | non-polymer | 595.0 | 4 | Chemie (9XX) PubChem (137348873) | |||
| 14 | CC, EA, EB, FA, GC... (j, I, g, m, i...) | CARDIOLIPIN | non-polymer | 1464.0 | 18 | Chemie (CDL) | |||
| 15 | AA, DB, FB, OC, VA... (G, f, g, q, b) | (2R)-3-(((2-aminoethoxy)(hydroxy)phosphoryl)oxy)-2-(palmitoyloxy)propyl (E)-octadec-9-enoate | non-polymer | 718.0 | 6 | Chemie (9Y0) | |||
| 16 | BA, CA, JA, KA (I, L) | HEME-A | non-polymer | 852.8 | 4 | Chemie (HEA) | |||
| 17 | AB, BB, CB, DA, IA... (d, e, I, L) | COPPER (II) ION | non-polymer | 63.5 | 8 | Chemie (CU) PubChem (27099) | |||
| 18 | GA, PC (I, q) | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) PubChem (985) | |||
| 19 | HA, PA (I, L) | OXYGEN MOLECULE | non-polymer | 32.0 | 2 | Chemie (OXY) PubChem (977) | |||
| 20 | KB, LB, QA, RA, WB... (i, U, j) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 6 | Chemie (HEM) | |||
| 21 | MC, TA (p, V) | FE2/S2 (INORGANIC) CLUSTER | non-polymer | 175.8 | 2 | Chemie (FES) | |||
| 22 | GB, HC, KC, LC, UA... (i, n, o, p, V...) | (2R)-2-(hexadecanoyloxy)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propyl (9S)-9-methyloctadecanoate | non-polymer | 853.1 | 6 | Chemie (9YF) | |||
| 23 | AC, BC, EC, FC, HB... (j, m, i) | MENAQUINONE-9 | non-polymer | 785.2 | 10 | Chemie (MQ9) PubChem (5288844) | |||
| 24 | IC, JC (o) | HEME C | non-polymer | 618.5 | 2 | Chemie (HEC) | |||
| 25 | AD, BD, QC, RC, SC... (o, p, I, L, U...) | water | water | 18.0 | 74 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 24 |
| Total formula weight | 717616.8 | |
| Non-Polymers* | Number of molecules | 70 |
| Total formula weight | 55795.8 | |
| All* | Total formula weight | 773412.6 |
