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9W6T

Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5) assembled with DNA truncated at SHL-5.5

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, K, O
(A, E, K, O)
Histone H3.1polymer9611276.24UniProt (P68431)
Pfam (PF00125)
Homo sapiens (human)Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
2B, F, L, P
(B, F, L, P)
Histone H4polymer849647.34UniProt (P62805)
Pfam (PF15511)
Homo sapiens (human)
3C, G, M, Q
(C, G, M, Q)
Histone H2A type 1-Dpolymer10211151.04UniProt (P20671)
Pfam (PF00125)
Pfam (PF16211)
Homo sapiens (human)Histone H2A.3,Histone H2A/g
4D, H, N
(D, H, N)
Histone H2B type 1-Bpolymer879674.13UniProt (P33778)
Pfam (PF00125)
Homo sapiens (human)H2B-clustered histone 3,Histone H2B.1,Histone H2B.f,H2B/f
5I, S
(I, S)
DNA (128-MER)polymer12839706.32Escherichia coli
6J, T
(J, T)
DNA (128-MER)polymer12839306.02Escherichia coli
7R
(R)
Histone H2B type 1-Jpolymer859409.81UniProt (P06899)
Pfam (PF00125)
Homo sapiens (human)Histone H2B.1,Histone H2B.r,H2B/r
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains20
Total formula weight324754.8
All*Total formula weight324754.8
*Water molecules are not included.

258735

PDB entries from 2026-08-26

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