9W0G
CryoEM structure of EV-D68 strain Fermon in complex with MFSD6-R196-L226
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Capsid protein VP1 | polymer | 296 | 32696.1 | 1 | UniProt (Q68T42) | enterovirus D68 (EV68 EV-68) | P1D,Virion protein 1 |
| 2 | B (B) | Capsid protein VP2 | polymer | 248 | 27706.3 | 1 | UniProt (Q68T42) | enterovirus D68 (EV68 EV-68) | P1B,Virion protein 2 |
| 3 | C (C) | Capsid protein VP3 | polymer | 247 | 27244.0 | 1 | UniProt (A0A5B9NN55) | enterovirus D68 (EV68 EV-68) | |
| 4 | D (D) | Capsid protein VP4 | polymer | 69 | 7468.2 | 1 | UniProt (Q68T42) | enterovirus D68 (EV68 EV-68) | |
| 5 | E (E) | Major facilitator superfamily domain-containing protein 6 | polymer | 31 | 3515.0 | 1 | UniProt (Q6ZSS7) | Homo sapiens (human) | Macrophage MHC class I receptor 2 homolog |
| 6 | F (F) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB | |||
| 7 | G (G) | N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 674.6 | 1 | In PDB BIRD (PRD_900046) |
Sequence modifications
A: 1 - 295 (UniProt: Q68T42)
C: 1 - 247 (UniProt: A0A5B9NN55)
| PDB | External Database | Details |
|---|---|---|
| Asn 296 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Asp 59 | Gly 376 | conflict |
| Ala 241 | Gly 558 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 98629.5 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1731.6 | |
| All* | Total formula weight | 100361.1 |
