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9VYL

Crystal structure of BdThsB1 with NAD

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Putative cyclic ADP-D-ribose synthase TIR1polymer24328443.54UniProt (A0A5B8Z670)
Pfam (PF08937)
Cytobacillus dafuensisNAD cyclase,Putative cADPR synthase TIR1,Thoeris protein TIR1
2E, IA, O, Y
(A, D, B, C)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.44Chemie (NAD)
3AA, F, G, JA, KA...
(C, A, D, B)
SPERMIDINEnon-polymer145.28Chemie (SPD)
4BA, H, LA, R
(C, A, D, B)
ZINC IONnon-polymer65.44Chemie (ZN)
5CA, DA, EA, FA, GA...
(C, A, D, B)
SODIUM IONnon-polymer23.024Chemie (NA)
6SA, TA, UA, VA
(A, B, C, D)
waterwater18.01010Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 224 (UniProt: A0A5B8Z670)
PDBExternal DatabaseDetails
Met -18-initiating methionine
Lys -17-expression tag
Ser -16-expression tag
Ser -15-expression tag
His -14-expression tag
His -13-expression tag
His -12-expression tag
His -11-expression tag
His -10-expression tag
His -9-expression tag
Glu -8-expression tag
Asn -7-expression tag
Leu -6-expression tag
Tyr -5-expression tag
Phe -4-expression tag
Gln -3-expression tag
Ser -2-expression tag
Asn -1-expression tag
Ala 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight113774.2
Non-Polymers*Number of molecules40
Total formula weight4629.1
All*Total formula weight118403.2
*Water molecules are not included.

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PDB entries from 2026-03-11

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