9VTQ
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | crRNA from Vibrio parahaemolyticus | polymer | 60 | 19405.7 | 1 | GenBank (BA000032.2) | Vibrio parahaemolyticus RIMD 2210633 | |
| 2 | B (2) | Target strand DNA | polymer | 100 | 30950.7 | 1 | Vibrio parahaemolyticus RIMD 2210633 | ||
| 3 | C (3) | Non-target strand DNA | polymer | 100 | 30751.7 | 1 | Vibrio parahaemolyticus RIMD 2210633 | ||
| 4 | D, E, F, G, H... (A, B, C, D, E...) | Type I-F CRISPR-associated protein Csy3 | polymer | 347 | 39455.4 | 6 | UniProt (Q87GC8) | Vibrio parahaemolyticus RIMD 2210633 | |
| 5 | J (G) | CRISPR-associated protein Csy2 | polymer | 640 | 73021.9 | 1 | UniProt (Q87GC9) | Vibrio parahaemolyticus RIMD 2210633 | |
| 6 | K (H) | CRISPR-associated protein, Csy4 family | polymer | 198 | 22919.0 | 1 | UniProt (Q87GC7) | Vibrio parahaemolyticus RIMD 2210633 | |
| 7 | L, M (I, J) | TniQ | polymer | 406 | 47357.1 | 2 | UniProt (Q87GD0) | Vibrio parahaemolyticus RIMD 2210633 | |
| 8 | N (1) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
I, J: 1 - 399 (UniProt: Q87GD0)
| PDB | External Database | Details |
|---|---|---|
| Gly -6 | - | expression tag |
| Pro -5 | - | expression tag |
| Arg -4 | - | expression tag |
| Ile -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Glu -1 | - | expression tag |
| Phe 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 13 |
| Total formula weight | 508495.7 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 24.3 | |
| All* | Total formula weight | 508520.0 |
