9VP1
NADPH and 1-benzyl-4-methylpiperidin-3-one complex structure of Glucose Dehydrogenase M6-VAG from Bacillus megaterium
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Glucose 1-dehydrogenase | polymer | 262 | 28207.3 | 2 | UniProt (P40288) | Priestia megaterium | |
| 2 | C, D (A, B) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 2 | Chemie (NAP) | |||
| 3 | E (B) | (4~{R})-4-methyl-1-(phenylmethyl)piperidin-3-one | non-polymer | 203.3 | 1 | Chemie (A1D7O) PubChem (66769857) | |||
| 4 | F, G (A, B) | water | water | 18.0 | 112 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 261 (UniProt: P40288)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
| Ile 72 | Val 72 | conflict |
| Val 95 | Leu 95 | conflict |
| Ala 96 | Glu 96 | conflict |
| Pro 100 | Ser 100 | conflict |
| Arg 137 | Lys 137 | conflict |
| Arg 166 | Lys 166 | conflict |
| Lys 170 | Glu 170 | conflict |
| Gly 211 | Ser 211 | conflict |
| Leu 252 | Gln 252 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 56414.5 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 1690.1 | |
| All* | Total formula weight | 58104.6 |
