9VNS
NADPH and 1-benzyl-4-methylpiperidin-3-one complex structure of glucose dehydrogenase M6 from Bacillus megaterium
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Glucose 1-dehydrogenase | polymer | 263 | 28475.5 | 4 | UniProt (P40288) | Priestia megaterium | |
| 2 | E, G, H, I (A, B, C, D) | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | non-polymer | 743.4 | 4 | Chemie (NAP) | |||
| 3 | F (A) | (4~{R})-4-methyl-1-(phenylmethyl)piperidin-3-one | non-polymer | 203.3 | 1 | Chemie (A1D7O) PubChem (66769857) | |||
| 4 | J, K, L, M (A, B, C, D) | water | water | 18.0 | 143 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 261 (UniProt: P40288)
| PDB | External Database | Details |
|---|---|---|
| His -1 | - | expression tag |
| Met 0 | - | expression tag |
| Arg 54 | Lys 54 | conflict |
| Ile 72 | Val 72 | conflict |
| Pro 100 | Ser 100 | conflict |
| Arg 137 | Lys 137 | conflict |
| Arg 166 | Lys 166 | conflict |
| Lys 170 | Glu 170 | conflict |
| Leu 252 | Gln 252 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 113902.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 3176.9 | |
| All* | Total formula weight | 117078.9 |
