9VG7

Cryo-EM Structure of Rc-o319 Ectodomain trimer

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C (A, B, C)	Spike glycoprotein	polymer	1167	129563.2	3	UniProt (A0A7R6WCE7) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) UniProt (by SIFTS) (P0DTC2)	Homo sapiens (human)	S glycoprotein,E2,Peplomer protein
2	D, F, G, H, J... (D, F, G, H, J...)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	9	In PDB GlyTouCan (G42666HT)
3	E, I, M (E, I, M)	beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		586.5	3	In PDB GlyTouCan (G15407YE)
4	P, Q, R, S, T... (A, B, C)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	9	Chemie (NAG)

Sequence modifications

A, B, C: 41 - 1198 (UniProt: A0A7R6WCE7)

PDB	External Database	Details
Pro 805	Phe 779	conflict
Pro 880	Ala 854	conflict
Pro 887	Ala 861	conflict
Pro 930	Ala 904	conflict
Pro 974	Lys 948	conflict
Pro 975	Val 949	conflict
Gly 1199	-	expression tag
Thr 1200	-	expression tag
Lys 1201	-	expression tag
His 1202	-	expression tag
His 1203	-	expression tag
His 1204	-	expression tag
His 1205	-	expression tag
His 1206	-	expression tag
His 1207	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	3
	Total formula weight	388689.5
Branched	Number of molecules	12
	Total formula weight	5579.2
Non-Polymers*	Number of molecules	9
	Total formula weight	1990.9
All*	Total formula weight	396259.6

*Water molecules are not included.