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9VEW

SIRT2 structure in complex with H3K18myr peptide and native NAD: pre-catalysis state 2

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
NAD-dependent protein deacetylase sirtuin-2polymer30434404.71UniProt (Q8IXJ6)
Pfam (PF02146)
Homo sapiens (human)NAD-dependent protein defatty-acylase sirtuin-2,Regulatory protein SIR2 homolog 2,SIR2-like protein 2
2B
(C)
Histone H3.1polymer7784.91UniProt (P68431)Homo sapiensHistone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
3C
(A)
NICOTINAMIDE-ADENINE-DINUCLEOTIDEnon-polymer663.41Chemie (NAD)
4D, E
(A)
1,2-ETHANEDIOLnon-polymer62.12Chemie (EDO)
5F
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
6G
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
7H
(C)
MYRISTIC ACIDnon-polymer228.41Chemie (MYR)
8I
(A)
waterwater18.032Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight35189.6
Non-Polymers*Number of molecules6
Total formula weight1173.4
All*Total formula weight36363.1
*Water molecules are not included.

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PDB entries from 2025-12-03

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