9VBJ
Cryo-EM structure of human PLD4 apo form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | 5'-3' exonuclease PLD4 | polymer | 422 | 46287.3 | 4 | UniProt (Q96BZ4) | Homo sapiens (human) | (S,S)-bis(monoacylglycero)phosphate synthase PLD4,Phospholipase D family member 4,Phospholipase D4 |
| 2 | E, F, G, H, I... (E, F, G, H, I...) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 9 | In PDB GlyTouCan (G42666HT) | |||
| 3 | AA, N, O, P, Q... (D, A, B, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 14 | Chemie (NAG) |
Sequence modifications
A, B, C, D: 91 - 506 (UniProt: Q96BZ4)
| PDB | External Database | Details |
|---|---|---|
| Leu 507 | - | expression tag |
| Glu 508 | - | expression tag |
| Val 509 | - | expression tag |
| Leu 510 | - | expression tag |
| Phe 511 | - | expression tag |
| Gln 512 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 185149.1 | |
| Branched | Number of molecules | 9 |
| Total formula weight | 3819.6 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 3096.9 | |
| All* | Total formula weight | 192065.6 |
