9VBD
Cryo-EM structure of CARD1 ectodomain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Leucine-rich repeat receptor protein kinase HPCA1,Maltose/maltodextrin-binding periplasmic protein | polymer | 893 | 98137.2 | 1 | UniProt (Q8GZ99) UniProt (P0AEX9) | Arabidopsis thaliana (thale cress) | Protein HYDROGEN-PEROXIDE-INDUCED CALCIUM INCREASES 1,MMBP,Maltodextrin-binding protein,Maltose-binding protein,MBP |
| 2 | B, C, D, F (B, C, D, F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 3 | E (E) | beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G40894EI) | |||
| 4 | G, H, I (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 3 | Chemie (NAG) | |||
| 5 | J (A) | COPPER (II) ION | non-polymer | 63.5 | 1 | Chemie (CU) PubChem (27099) |
Sequence modifications
A: 24 - 546 (UniProt: Q8GZ99)
A: 551 - 916 (UniProt: P0AEX9)
| PDB | External Database | Details |
|---|---|---|
| Gly 547 | - | linker |
| Ser 548 | - | linker |
| Ala 549 | - | linker |
| Met 550 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Val 862 | Ala 338 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 98137.2 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2446.3 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 727.2 | |
| All* | Total formula weight | 101310.7 |
