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9V9H

Cryo-EM structure of the cPRC1-di-nucleosome (tight) complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, K, M
(A, E, K, M)
Histone H3.1polymer13615437.24UniProt (P68431)Homo sapiens (human)Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l
2B, F, Q, R
(B, F, Q, R)
Histone H4polymer10311394.44UniProt (P62805)Homo sapiens (human)
3C, G, L, O
(C, G, L, O)
Histone H2A type 1-Hpolymer12813935.34UniProt (Q96KK5)Homo sapiens (human)H2A-clustered histone 12,Histone H2A/s
4D, H, N, P
(D, H, N, P)
Histone H2B type 1-C/E/F/G/Ipolymer12613937.24UniProt (P62807)Homo sapiens (human)Histone H2B.1 A,Histone H2B.a,H2B/a,Histone H2B.g,H2B/g,Histone H2B.h,H2B/h,Histone H2B.k,H2B/k,Histone H2B.l,H2B/l
5I
(I)
DNA (276-MER)polymer27685179.11Homo sapiens
6J
(J)
DNA (276-MER)polymer27685290.21Homo sapiens
7S, U
(S, U)
Polycomb complex protein BMI-1polymer32637006.12UniProt (P35226)Homo sapiens (human)Polycomb group RING finger protein 4,RING finger protein 51
8T, V
(T, V)
E3 ubiquitin-protein ligase RING2polymer33637706.42UniProt (Q99496)Homo sapiens (human)Huntingtin-interacting protein 2-interacting protein 3,HIP2-interacting protein 3,Protein DinG,RING finger protein 1B,RING1b,RING finger protein 2,RING finger protein BAP-1,RING-type E3 ubiquitin transferase RING2
9AA, BA, CA, DA, W...
(U, V, S, T)
ZINC IONnon-polymer65.48Chemie (ZN)
PubChem (32051)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains22
Total formula weight538710.6
Non-Polymers*Number of molecules8
Total formula weight523.3
All*Total formula weight539233.8
*Water molecules are not included.

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PDB entries from 2026-06-10

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