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9V88

Crystal structure of d(CGTTAACG)2 with a four-carbon linker containing quinoxaline-acridine asymmetric intercalator compound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
DNA (5'-D(P*CP*GP*TP*TP*AP*AP*CP*G)-3')polymer82426.62synthetic construct
2C, E
(A)
ACETATE IONnon-polymer59.02Chemie (ACT)
PubChem (175)
3D
(A)
N-[4-(acridin-9-ylamino)butyl]quinoxaline-2-carboxamidenon-polymer421.51Chemie (XAU)
4F
(B)
CALCIUM IONnon-polymer40.11Chemie (CA)
PubChem (271)
5G, H
(A, B)
waterwater18.020Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight4853.2
Non-Polymers*Number of molecules4
Total formula weight579.7
All*Total formula weight5432.9
*Water molecules are not included.

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PDB entries from 2026-06-10

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