9UYL
Cryo-EM structure of the G protein-coupled receptor 1 (GPR1) bound to chemerin and beta-arrestin 1 (Conformation 4)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (R) | Chemerin-like receptor 2,Vasopressin V2 receptor | polymer | 396 | 46071.4 | 1 | UniProt (P46091) UniProt (P30518) Pfam (PF00001) | Homo sapiens (human) | Chemerin chemokine-like receptor 2,Chemokine-like receptor 2,G-protein coupled receptor 1,V2R,AVPR V2,Antidiuretic hormone receptor,Renal-type arginine vasopressin receptor |
| 2 | B (L) | Retinoic acid receptor responder protein 2 | polymer | 153 | 17720.5 | 1 | UniProt (Q99969) | Homo sapiens (human) | Chemerin,RAR-responsive protein TIG2,Tazarotene-induced gene 2 protein |
| 3 | C (A) | Beta-arrestin-1 | polymer | 376 | 42167.1 | 1 | UniProt (P49407) Pfam (PF00339) Pfam (PF02752) | Homo sapiens (human) | Arrestin beta-1,Non-visual arrestin-2 |
| 4 | D (B) | Nanobody 32 | polymer | 120 | 13238.7 | 1 | Escherichia phage EcSzw-2 | ||
| 5 | E (C) | Single-chain fragment variable 30 (scFv30) | polymer | 245 | 26157.9 | 1 | Homo sapiens (human) |
Sequence modifications
R: 2 - 1342 (UniProt: P46091)
R: 1343 - 1371 (UniProt: P30518)
L: 0 - 137 (UniProt: Q99969)
A: 1 - 376 (UniProt: P49407)
| PDB | External Database | Details |
|---|---|---|
| Trp -44 | - | expression tag |
| Ser -43 | - | expression tag |
| His -42 | - | expression tag |
| Pro -41 | - | expression tag |
| Gln -40 | - | expression tag |
| Phe -39 | - | expression tag |
| Glu -38 | - | expression tag |
| Lys -37 | - | expression tag |
| Gly -36 | - | expression tag |
| Ser -35 | - | expression tag |
| Gly -34 | - | expression tag |
| Ala -33 | - | expression tag |
| Gly -32 | - | expression tag |
| Ala -31 | - | expression tag |
| Ser -30 | - | expression tag |
| Ala -29 | - | expression tag |
| Gly -28 | - | expression tag |
| Ser -27 | - | expression tag |
| Trp -26 | - | expression tag |
| Ser -25 | - | expression tag |
| His -24 | - | expression tag |
| Pro -23 | - | expression tag |
| Gln -22 | - | expression tag |
| Phe -21 | - | expression tag |
| Glu -20 | - | expression tag |
| Lys -19 | - | expression tag |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Asp -16 | - | expression tag |
| Tyr -15 | - | expression tag |
| Lys -14 | - | expression tag |
| Asp -13 | - | expression tag |
| Asp -12 | - | expression tag |
| Asp -11 | - | expression tag |
| Asp -10 | - | expression tag |
| Lys -9 | - | expression tag |
| Glu -8 | - | expression tag |
| Phe -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Glu -5 | - | expression tag |
| Val -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Phe -2 | - | expression tag |
| Gln -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Pro 1 | - | expression tag |
L: 0 - 137 (UniProt: Q99969)
| PDB | External Database | Details |
|---|---|---|
| Met -15 | - | initiating methionine |
| Lys -14 | - | expression tag |
| Thr -13 | - | expression tag |
| Ile -12 | - | expression tag |
| Ile -11 | - | expression tag |
| Ala -10 | - | expression tag |
| Leu -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Tyr -7 | - | expression tag |
| Ile -6 | - | expression tag |
| Phe -5 | - | expression tag |
| Cys -4 | - | expression tag |
| Leu -3 | - | expression tag |
| Val -2 | - | expression tag |
| Phe -1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ala 59 | Cys 59 | engineered mutation |
| Ser 125 | Cys 125 | engineered mutation |
| Ile 140 | Cys 140 | engineered mutation |
| Val 150 | Cys 150 | engineered mutation |
| Glu 169 | Arg 169 | engineered mutation |
| Val 242 | Cys 242 | engineered mutation |
| Val 251 | Cys 251 | engineered mutation |
| Ser 269 | Cys 269 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 145355.6 | |
| All* | Total formula weight | 145355.6 |






