9UE3
The structure of FIPV spike glycoprotein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Spike glycoprotein,Fibritin | polymer | 1451 | 159548.4 | 1 | UniProt (P10033) UniProt (A0A346FJN8) | Feline infectious peritonitis virus (strain 79-1146) | S glycoprotein,E2,Peplomer protein,Phage neck whiskers protein |
| 2 | B (B) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 1 | In PDB GlyTouCan (G15407YE) | |||
| 3 | C, H (C, I) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 2 | In PDB GlyTouCan (G81315DD) | |||
| 4 | D, E, F, G (E, F, G, H) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 4 | In PDB GlyTouCan (G42666HT) | |||
| 5 | I, J, K, L, M... (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) |
Sequence modifications
A: 20 - 1391 (UniProt: P10033)
A: 1400 - 1426 (UniProt: A0A346FJN8)
| PDB | External Database | Details |
|---|---|---|
| Asn 54 | Val 54 | conflict |
| Ile 401 | Arg 401 | conflict |
| Val 744 | Ala 744 | variant |
| Pro 1144 | Glu 1144 | conflict |
| Pro 1145 | Leu 1145 | conflict |
| Glu 1325 | Arg 1325 | variant |
| Gly 1392 | - | linker |
| Gly 1393 | - | linker |
| Gly 1394 | - | linker |
| Ser 1395 | - | linker |
| Gly 1396 | - | linker |
| Gly 1397 | - | linker |
| Gly 1398 | - | linker |
| Ser 1399 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly 1427 | - | expression tag |
| Ser 1428 | - | expression tag |
| Gly 1429 | - | expression tag |
| Gly 1430 | - | expression tag |
| Gly 1431 | - | expression tag |
| Ser 1432 | - | expression tag |
| Ala 1433 | - | expression tag |
| Trp 1434 | - | expression tag |
| Ser 1435 | - | expression tag |
| His 1436 | - | expression tag |
| Pro 1437 | - | expression tag |
| Gln 1438 | - | expression tag |
| Phe 1439 | - | expression tag |
| Glu 1440 | - | expression tag |
| Lys 1441 | - | expression tag |
| Gly 1442 | - | expression tag |
| Gly 1443 | - | expression tag |
| Gly 1444 | - | expression tag |
| Ser 1445 | - | expression tag |
| Gly 1446 | - | expression tag |
| Gly 1447 | - | expression tag |
| Gly 1448 | - | expression tag |
| Ser 1449 | - | expression tag |
| Gly 1450 | - | expression tag |
| Gly 1451 | - | expression tag |
| Ser 1452 | - | expression tag |
| Ser 1453 | - | expression tag |
| Ala 1454 | - | expression tag |
| Trp 1455 | - | expression tag |
| Ser 1456 | - | expression tag |
| His 1457 | - | expression tag |
| Pro 1458 | - | expression tag |
| Gln 1459 | - | expression tag |
| Phe 1460 | - | expression tag |
| Glu 1461 | - | expression tag |
| Lys 1462 | - | expression tag |
| His 1463 | - | expression tag |
| His 1464 | - | expression tag |
| His 1465 | - | expression tag |
| His 1466 | - | expression tag |
| His 1467 | - | expression tag |
| His 1468 | - | expression tag |
| His 1469 | - | expression tag |
| His 1470 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 159548.4 | |
| Branched | Number of molecules | 7 |
| Total formula weight | 3781.5 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 3318.1 | |
| All* | Total formula weight | 166648.0 |
