9UB7
Structure of glycosylphosphatidylinositol transamidase,state 1
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | GPI transamidase component GAA1 | polymer | 614 | 69279.8 | 1 | UniProt (P39012) Pfam (PF04114) | Saccharomyces cerevisiae S288C | |
| 2 | B (B) | GPI transamidase component GAB1 | polymer | 394 | 44768.9 | 1 | UniProt (P41733) Pfam (PF06728) | Saccharomyces cerevisiae S288C | Cell division control protein 91 |
| 3 | C (C) | GPI-anchor transamidase | polymer | 411 | 47452.2 | 1 | UniProt (P49018) Pfam (PF01650) | Saccharomyces cerevisiae S288C | GPI transamidase |
| 4 | D (D) | GPI transamidase component GPI17 | polymer | 534 | 60862.7 | 1 | UniProt (Q04080) Pfam (PF10510) | Saccharomyces cerevisiae S288C | |
| 5 | E (E) | GPI transamidase component GPI16 | polymer | 610 | 68836.0 | 1 | UniProt (P38875) Pfam (PF04113) | Saccharomyces cerevisiae S288C | |
| 6 | F, G (F, G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
| 7 | H (J) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 8 | I, M (A, B) | CHOLESTEROL HEMISUCCINATE | non-polymer | 486.7 | 2 | Chemie (Y01) PubChem (65082) | |||
| 9 | J, N (A, B) | (11R,14S)-17-amino-14-hydroxy-8,14-dioxo-9,13,15-trioxa-14lambda~5~-phosphaheptadecan-11-yl decanoate | non-polymer | 495.6 | 2 | Chemie (XKP) | |||
| 10 | K, O, P (A, B) | TETRADECANE | non-polymer | 198.4 | 3 | Chemie (C14) PubChem (12389) | |||
| 11 | L, Q, R (A, B) | DODECANE | non-polymer | 170.3 | 3 | Chemie (D12) PubChem (5359624) PubChem (8182) | |||
| 12 | S (B) | DECANE | non-polymer | 142.3 | 1 | Chemie (D10) PubChem (15600) | |||
| 13 | T (B) | [(2~{R})-1-[[(1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-azanyl-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-6-heptanoyloxy-3,4,5-tris(oxidanyl)cyclohexyl]oxy-oxidanyl-phosphoryl]oxy-3-decoxy-propan-2-yl] nonanoate | non-polymer | 888.0 | 1 | Chemie (A1EOT) | |||
| 14 | U (E) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) PubChem (24139) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 291199.6 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1597.5 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 4322.3 | |
| All* | Total formula weight | 297119.4 |
