9UB1
The structure of Myanmar_N2 and M6B12_Fab complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Vasodilator-stimulated phosphoprotein,Neuraminidase | polymer | 489 | 54393.0 | 4 | UniProt (P50552) UniProt (C3PQB5) | Homo sapiens (human) | VASP |
| 2 | E, G, I, K (E, G, I, K) | M6B12 antibody heavy chain | polymer | 231 | 24886.5 | 4 | Homo sapiens (human) | ||
| 3 | F, H, J, L (F, H, J, L) | M6B12 antibody light chain | polymer | 215 | 23523.1 | 4 | Homo sapiens (human) | ||
| 4 | M, N, O, P (M, N, O, P) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 4 | In PDB GlyTouCan (G80966KZ) | |||
| 5 | AA, CA, DA, EA, Q... (C, D, A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 12 | Chemie (NAG) | |||
| 6 | BA, FA, T, X (C, D, A, B) | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) PubChem (271) |
Sequence modifications
A, B, C, D: 48 - 90 (UniProt: P50552)
A, B, C, D: 103 - 489 (UniProt: C3PQB5)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| Leu 2 | - | expression tag |
| Leu 3 | - | expression tag |
| Val 4 | - | expression tag |
| Asn 5 | - | expression tag |
| Gln 6 | - | expression tag |
| Ser 7 | - | expression tag |
| His 8 | - | expression tag |
| Gln 9 | - | expression tag |
| Gly 10 | - | expression tag |
| Phe 11 | - | expression tag |
| Asn 12 | - | expression tag |
| Lys 13 | - | expression tag |
| Glu 14 | - | expression tag |
| His 15 | - | expression tag |
| Thr 16 | - | expression tag |
| Ser 17 | - | expression tag |
| Lys 18 | - | expression tag |
| Met 19 | - | expression tag |
| Val 20 | - | expression tag |
| Ser 21 | - | expression tag |
| Ala 22 | - | expression tag |
| Ile 23 | - | expression tag |
| Val 24 | - | expression tag |
| Leu 25 | - | expression tag |
| Tyr 26 | - | expression tag |
| Val 27 | - | expression tag |
| Leu 28 | - | expression tag |
| Leu 29 | - | expression tag |
| Ala 30 | - | expression tag |
| Ala 31 | - | expression tag |
| Ala 32 | - | expression tag |
| Ala 33 | - | expression tag |
| His 34 | - | expression tag |
| Ser 35 | - | expression tag |
| Ala 36 | - | expression tag |
| Phe 37 | - | expression tag |
| Ala 38 | - | expression tag |
| Ala 39 | - | expression tag |
| Asp 40 | - | expression tag |
| Pro 41 | - | expression tag |
| His 42 | - | expression tag |
| His 43 | - | expression tag |
| His 44 | - | expression tag |
| His 45 | - | expression tag |
| His 46 | - | expression tag |
| His 47 | - | expression tag |
| Leu 91 | - | linker |
| Val 92 | - | linker |
| Pro 93 | - | linker |
| Arg 94 | - | linker |
| Gly 95 | - | linker |
| Ser 96 | - | linker |
| Pro 97 | - | linker |
| Ser 98 | - | linker |
| Arg 99 | - | linker |
| Ser 100 | - | linker |
| Glu 101 | - | linker |
| Phe 102 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Lys 156 | Gln 136 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 411210.3 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 5589.0 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 2814.8 | |
| All* | Total formula weight | 419614.1 |






