9UAQ
CryoEM structure of GFP-like protein from Aequorea coerulescens with Trimbody
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | H3-PrAC-5350A,2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase | polymer | 320 | 34712.4 | 3 | UniProt (Q9WXS1) Pfam (PF01081) | synthetic construct | |
| 2 | D, E, F (D, E, F) | GFP-nanobody-TAIL | polymer | 233 | 25559.1 | 3 | synthetic construct | ||
| 3 | G, H, I (G, H, I) | Green fluorescent protein | polymer | 225 | 25464.5 | 3 | UniProt (Q6YGZ0) | Aequorea coerulescens (belt jellyfish) |
Sequence modifications
A, B, C: 2 - 117 (PDB: 9UAQ)
A, B, C: 118 - 321 (UniProt: Q9WXS1)
G, H, I: 5 - 231 (UniProt: Q6YGZ0)
A, B, C: 118 - 321 (UniProt: Q9WXS1)
| PDB | External Database | Details |
|---|---|---|
| Ile 141 | Lys 25 | conflict |
| Val 145 | Leu 29 | conflict |
| Ala 149 | Glu 33 | conflict |
| Ala 170 | Glu 54 | conflict |
| Val 173 | Phe 57 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ile 12 | Val 11 | conflict |
| Leu 65 | Phe 64 | conflict |
| Gys 66 | Ser 65 | chromophore |
| Gys 66 | Tyr 66 | chromophore |
| Gys 66 | Gly 67 | chromophore |
| Glu 102 | Lys 101 | conflict |
| Ala 207 | Thr 206 | conflict |
| Gly 223 | Glu 222 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 9 |
| Total formula weight | 257208.0 | |
| All* | Total formula weight | 257208.0 |






