9TM6
Structure of duck RIG-I (delta CARDs) bound to 31-mer RNA mismatched hairpin with 5'pppG-C blunt end mimicking the influenza A virus vRNA promoter (panhandle) and to ADP.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | RNA helicase | polymer | 692 | 79358.1 | 1 | UniProt (D3TI84) | Anas platyrhynchos (mallard) | Rig-I (delta CARDs) |
| 2 | B (R) | 31-mer RNA hairpin with 5'pppG-C blunt end mimicking the influenza A virus vRNA promoter (panhandle) | polymer | 30 | 9652.8 | 1 | Influenza A virus | ||
| 3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 5 | E (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 6 | F (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 7 | G (R) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (GTP) | |||
| 8 | H, I (A, R) | water | water | 18.0 | 128 | Chemie (HOH) |
Sequence modifications
A: 241 - 932 (UniProt: D3TI84)
| PDB | External Database | Details |
|---|---|---|
| Gln 375 | Glu 376 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 89010.9 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1075.5 | |
| All* | Total formula weight | 90086.5 |
