9TL1
Structure of duck RIG-I (delta CARDs) bound to 31-mer RNA mismatched hairpin with 5'ppA-U blunt end mimicking the influenza B virus vRNA promoter (panhandle) and to ADP.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | RNA helicase | polymer | 692 | 79358.1 | 1 | UniProt (D3TI84) | Anas platyrhynchos (mallard) | |
| 2 | B (R) | 31-mer RNA hairpin with 5'ppA-U blunt end mimicking the influenza B virus vRNA promoter (panhandle). | polymer | 30 | 9614.8 | 1 | Influenza B virus | ||
| 3 | C (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 4 | D, I (A, R) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 2 | Chemie (ADP) | |||
| 5 | E, G (A, R) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | F (A) | POTASSIUM ION | non-polymer | 39.1 | 1 | Chemie (K) | |||
| 7 | H (R) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 8 | J, K (A, R) | water | water | 18.0 | 333 | Chemie (HOH) |
Sequence modifications
A: 241 - 932 (UniProt: D3TI84)
| PDB | External Database | Details |
|---|---|---|
| Gln 375 | Glu 376 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 88972.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1167.4 | |
| All* | Total formula weight | 90140.3 |
