9T6M

E. coli 70S ribosome from delta-10 strain

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	16S rRNA	polymer	1542	499873.4	1	GenBank (1403754823)	Escherichia coli
2	B (B)	Small ribosomal subunit protein uS2	polymer	241	26781.7	1	UniProt (P0A7V0)	Escherichia coli	30S ribosomal protein S2
3	C (C)	Small ribosomal subunit protein uS3	polymer	233	26031.3	1	UniProt (P0A7V3)	Escherichia coli	30S ribosomal protein S3
4	D (D)	Small ribosomal subunit protein uS4	polymer	206	23514.2	1	UniProt (P0A7V8)	Escherichia coli	30S ribosomal protein S4
5	E (E)	Small ribosomal subunit protein uS5	polymer	167	17629.4	1	UniProt (P0A7W1)	Escherichia coli	30S ribosomal protein S5
6	F (F)	Small ribosomal subunit protein bS6, fully modified isoform	polymer	135	15727.5	1	UniProt (P02358)	Escherichia coli
7	G (G)	Small ribosomal subunit protein uS7	polymer	179	20055.2	1	UniProt (P02359)	Escherichia coli	30S ribosomal protein S7
8	H (H)	Small ribosomal subunit protein uS8	polymer	130	14146.6	1	UniProt (P0A7W7)	Escherichia coli	30S ribosomal protein S8
9	I (I)	Small ribosomal subunit protein uS9	polymer	130	14886.3	1	UniProt (P0A7X3)	Escherichia coli	30S ribosomal protein S9
10	J (J)	Small ribosomal subunit protein uS10	polymer	103	11755.6	1	UniProt (P0A7R5)	Escherichia coli	30S ribosomal protein S10,Transcription termination/antitermination protein NusE
11	K (K)	Small ribosomal subunit protein uS11	polymer	129	13872.0	1	UniProt (P0A7R9)	Escherichia coli	30S ribosomal protein S11
12	L (L)	Small ribosomal subunit protein uS12	polymer	124	13814.2	1	UniProt (P0A7S3)	Escherichia coli	30S ribosomal protein S12
13	M (M)	Small ribosomal subunit protein uS13	polymer	118	13128.5	1	UniProt (P0A7S9)	Escherichia coli	30S ribosomal protein S13
14	N (N)	Small ribosomal subunit protein uS14	polymer	101	11606.6	1	UniProt (P0AG59)	Escherichia coli	30S ribosomal protein S14
15	O (O)	Small ribosomal subunit protein uS15	polymer	89	10290.8	1	UniProt (P0ADZ4)	Escherichia coli	30S ribosomal protein S15
16	P (P)	Small ribosomal subunit protein bS16	polymer	82	9207.6	1	UniProt (P0A7T3)	Escherichia coli	30S ribosomal protein S16
17	Q (Q)	Small ribosomal subunit protein uS17	polymer	84	9724.5	1	UniProt (P0AG63)	Escherichia coli	30S ribosomal protein S17
18	R (R)	Small ribosomal subunit protein bS18	polymer	75	9005.5	1	UniProt (P0A7T7)	Escherichia coli	30S ribosomal protein S18
19	S (S)	Small ribosomal subunit protein uS19	polymer	92	10455.4	1	UniProt (P0A7U3)	Escherichia coli	30S ribosomal protein S19
20	T (T)	Small ribosomal subunit protein bS20	polymer	87	9708.5	1	UniProt (P0A7U7)	Escherichia coli	30S ribosomal protein S20
21	U (U)	Small ribosomal subunit protein bS21	polymer	71	8524.0	1	UniProt (P68679)	Escherichia coli	30S ribosomal protein S21
22	V (X)	mRNA	polymer	120	39004.7	1		Escherichia coli
23	W (Y)	tRNA(Phe)	polymer	76	24750.0	1	GenBank (CP054236.1)	Escherichia coli
24	DB, X (Z, 5)	tRNA(fMet)	polymer	77	24848.9	2	GenBank (1845258627)	Escherichia coli
25	Y (a)	23S rRNA	polymer	2904	941726.5	1		Escherichia coli
26	Z (b)	5S rRNA	polymer	120	38790.1	1	GenBank (CP035706.1)	Escherichia coli
27	AA (c)	Large ribosomal subunit protein uL2	polymer	273	29923.6	1	UniProt (P60422)	Escherichia coli	50S ribosomal protein L2
28	BA (d)	Large ribosomal subunit protein uL3	polymer	209	22291.6	1	UniProt (P60438)	Escherichia coli	50S ribosomal protein L3
29	CA (e)	Large ribosomal subunit protein uL4	polymer	201	22121.6	1	UniProt (P60723)	Escherichia coli	50S ribosomal protein L4
30	DA (f)	Large ribosomal subunit protein uL5	polymer	179	20333.6	1	UniProt (P62399)	Escherichia coli	50S ribosomal protein L5
31	EA (g)	Large ribosomal subunit protein uL6	polymer	177	18932.8	1	UniProt (P0AG55)	Escherichia coli	50S ribosomal protein L6
32	FA (h)	Large ribosomal subunit protein bL9	polymer	149	15789.0	1	UniProt (P0A7R1)	Escherichia coli	50S ribosomal protein L9
33	GA (i)	Large ribosomal subunit protein uL13	polymer	142	16050.6	1	UniProt (P0AA10)	Escherichia coli	50S ribosomal protein L13
34	HA (j)	Large ribosomal subunit protein uL14	polymer	123	13565.1	1	UniProt (P0ADY3)	Escherichia coli	50S ribosomal protein L14
35	IA (k)	Large ribosomal subunit protein uL15	polymer	144	15008.5	1	UniProt (P02413)	Escherichia coli	50S ribosomal protein L15
36	JA (l)	Large ribosomal subunit protein uL16	polymer	136	15343.3	1	UniProt (A7ZSK2)	Escherichia coli	50S ribosomal protein L16
37	KA (m)	Large ribosomal subunit protein bL17	polymer	127	14393.7	1	UniProt (P0AG44)	Escherichia coli	50S ribosomal protein L17
38	LA (n)	Large ribosomal subunit protein uL18	polymer	117	12794.7	1	UniProt (P0C018)	Escherichia coli	50S ribosomal protein L18
39	MA (o)	Large ribosomal subunit protein bL19	polymer	115	13159.3	1	UniProt (P0A7K6)	Escherichia coli	50S ribosomal protein L19
40	NA (p)	Large ribosomal subunit protein bL20	polymer	118	13528.0	1	UniProt (P0A7L3)	Escherichia coli	50S ribosomal protein L20
41	OA (q)	Large ribosomal subunit protein bL21	polymer	103	11586.4	1	UniProt (P0AG48)	Escherichia coli	50S ribosomal protein L21
42	PA (r)	Large ribosomal subunit protein uL22	polymer	110	12253.4	1	UniProt (P61175)	Escherichia coli	50S ribosomal protein L22
43	QA (s)	Large ribosomal subunit protein uL23	polymer	100	11222.2	1	UniProt (P0ADZ0)	Escherichia coli	50S ribosomal protein L23
44	RA (t)	Large ribosomal subunit protein uL24	polymer	104	11339.3	1	UniProt (P60624)	Escherichia coli	50S ribosomal protein L24
45	SA (u)	Large ribosomal subunit protein bL25	polymer	94	10713.5	1	UniProt (P68919)	Escherichia coli	50S ribosomal protein L25
46	TA (v)	Large ribosomal subunit protein bL27	polymer	85	9146.5	1	UniProt (P0A7L8)	Escherichia coli	50S ribosomal protein L27
47	UA (w)	Large ribosomal subunit protein bL28	polymer	78	9027.6	1	UniProt (P0A7M2)	Escherichia coli	50S ribosomal protein L28
48	VA (x)	Large ribosomal subunit protein uL29	polymer	63	7286.5	1	UniProt (P0A7M6)	Escherichia coli	50S ribosomal protein L29
49	WA (y)	Large ribosomal subunit protein uL30	polymer	59	6554.8	1	UniProt (P0AG51)	Escherichia coli	50S ribosomal protein L30
50	XA (z)	Large ribosomal subunit protein bL32	polymer	57	6463.4	1	UniProt (P0A7N4)	Escherichia coli	50S ribosomal protein L32
51	YA (0)	Large ribosomal subunit protein bL33	polymer	55	6388.6	1	UniProt (P0A7N9)	Escherichia coli	50S ribosomal protein L33
52	ZA (1)	Large ribosomal subunit protein bL34	polymer	46	5397.5	1	UniProt (P0A7P5)	Escherichia coli	50S ribosomal protein L34
53	AB (2)	Large ribosomal subunit protein bL35	polymer	65	7313.0	1	UniProt (P0A7Q1)	Escherichia coli	50S ribosomal protein L35,Ribosomal protein A
54	BB (3)	Large ribosomal subunit protein bL36A	polymer	38	4377.4	1	UniProt (P0A7Q6)	Escherichia coli	50S ribosomal protein L36,Ribosomal protein B
55	CB (4)	Large ribosomal subunit protein bL31A	polymer	70	7887.1	1	UniProt (P0A7M9)	Escherichia coli	50S ribosomal protein L31
56	AE, AP, AQ, AR, AS... (A, a, F, M, b...)	POTASSIUM ION	non-polymer		39.1	132	Chemie (K)
57	AC, AD, AF, AG, AH... (A, a, b, c, d...)	MAGNESIUM ION	non-polymer		24.3	316	Chemie (MG)
58	LE, ME, NE, OE, PE (a)	N~1~-(3-azaniumylpropyl)butane-1,4-diaminium	non-polymer		148.3	5	Chemie (SR0)
59	QE, RE, SE, TE, UE... (a)	1,4-DIAMINOBUTANE	non-polymer		88.2	8	Chemie (PUT)
60	XS, YS (3, 4)	ZINC ION	non-polymer		65.4	2	Chemie (ZN)
61	AT, AU, BT, BU, CT... (E, y, H, z, K...)	water	water		18.0	4738	Chemie (HOH)

Sequence modifications

K: 1 - 129 (UniProt: P0A7R9)

PDB	External Database	Details
Ias 119	Asn 119	modified residue

l: 1 - 136 (UniProt: A7ZSK2)

PDB	External Database	Details
Ms6 82	Met 82	modified residue

Contents of the asymmetric unit

Polymers	Number of chains	56
	Total formula weight	2253900.0
Non-Polymers*	Number of molecules	463
	Total formula weight	14418.7
All*	Total formula weight	2268318.7

*Water molecules are not included.