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9T56

Cryo-EM structure of ISCro4-DBL-TBL-tDNA-dDNA synaptic complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
ISCro4 transposasepolymer34138131.74UniProt (D2TGM5)Citrobacter rodentium ICC168
2E
(E)
Target-binding loop (TBL) RNApolymer11135682.11GenBank (282947233)Citrobacter rodentium ICC168
3F
(F)
Donor-binding loop (DBL) RNApolymer7925278.91Citrobacter rodentium ICC168
4G
(G)
target DNA (tRNA) top strandpolymer3811616.51Citrobacter rodentium ICC168
5H
(H)
target DNA (tDNA) bottom strandpolymer3811776.61Citrobacter rodentium ICC168
6I
(I)
donor DNA (dDNA) top strandpolymer4413562.71Citrobacter rodentium ICC168
7J
(J)
donor DNA (dDNA) bottom strandpolymer4413531.71Citrobacter rodentium ICC168
8K, L
(G, I)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence modifications
A, B, C, D: 1 - 326 (UniProt: D2TGM5)
PDBExternal DatabaseDetails
Ser -2-expression tag
Asn -1-expression tag
Ala 0-expression tag
Ser 327-expression tag
Ser 328-expression tag
Gly 329-expression tag
Ser 330-expression tag
Leu 331-expression tag
Glu 332-expression tag
His 333-expression tag
His 334-expression tag
His 335-expression tag
His 336-expression tag
His 337-expression tag
His 338-expression tag
E: 1 - 104 (GenBank: 282947233)
PDBExternal DatabaseDetails
G -2-expression tag
G -1-expression tag
G 0-expression tag
U 105-expression tag
U 106-expression tag
U 107-expression tag
U 108-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight263975.4
Non-Polymers*Number of molecules2
Total formula weight48.6
All*Total formula weight264024.0
*Water molecules are not included.

249524

PDB entries from 2026-02-18

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