9SX5
Structural characterization of hibernating ribosomes in the Gram-negative pathogen Enterobacter cloacae complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | Large ribosomal subunit protein bL33 | polymer | 55 | 6388.6 | 1 | UniProt (A0A837FGC9) | Enterobacter hormaechei subsp. xiangfangensis | |
| 2 | B (1) | Large ribosomal subunit protein bL34 | polymer | 46 | 5397.5 | 1 | UniProt (A0A837FE37) | Enterobacter hormaechei subsp. xiangfangensis | |
| 3 | C (2) | Large ribosomal subunit protein bL35 | polymer | 65 | 7313.0 | 1 | UniProt (A0A837FIA3) | Enterobacter hormaechei subsp. xiangfangensis | |
| 4 | D (3) | Large ribosomal subunit protein bL36 | polymer | 38 | 4377.4 | 1 | UniProt (A0A837F528) | Enterobacter hormaechei subsp. xiangfangensis | |
| 5 | E (4) | Large ribosomal subunit protein bL31 | polymer | 70 | 7828.0 | 1 | UniProt (A0A837FG77) | Enterobacter hormaechei subsp. xiangfangensis | |
| 6 | F (5) | Large ribosomal subunit protein uL1 | polymer | 234 | 24607.4 | 1 | UniProt (A0A837F7J9) | Enterobacter hormaechei subsp. xiangfangensis | |
| 7 | G (A) | 16s rRNA (1539-MER) | polymer | 1541 | 499606.3 | 1 | GenBank (2283384853) | Enterobacter hormaechei subsp. xiangfangensis | |
| 8 | H (B) | Small ribosomal subunit protein uS2 | polymer | 241 | 26800.6 | 1 | UniProt (A0A837FF67) | Enterobacter hormaechei subsp. xiangfangensis | |
| 9 | I (C) | Small ribosomal subunit protein uS3 | polymer | 233 | 26031.3 | 1 | UniProt (A8AQL0) | Enterobacter hormaechei subsp. xiangfangensis | 30S ribosomal protein S3 |
| 10 | J (D) | Small ribosomal subunit protein uS4 | polymer | 206 | 23545.2 | 1 | UniProt (A0A837F8M8) | Enterobacter hormaechei subsp. xiangfangensis | |
| 11 | K (E) | Small ribosomal subunit protein uS5 | polymer | 166 | 17500.2 | 1 | UniProt (A8AQJ8) | Enterobacter hormaechei subsp. xiangfangensis | 30S ribosomal protein S5 |
| 12 | L (F) | Small ribosomal subunit protein bS6 | polymer | 131 | 15170.9 | 1 | UniProt (A0A837FLV2) | Enterobacter hormaechei subsp. xiangfangensis | |
| 13 | M (G) | Small ribosomal subunit protein uS7 | polymer | 156 | 17634.4 | 1 | UniProt (A0A837FLF1) | Enterobacter hormaechei subsp. xiangfangensis | |
| 14 | N (H) | Small ribosomal subunit protein uS8 | polymer | 130 | 14130.6 | 1 | UniProt (A0A837F8P7) | Enterobacter hormaechei subsp. xiangfangensis | |
| 15 | O (I) | Small ribosomal subunit protein uS9 | polymer | 130 | 14859.2 | 1 | UniProt (A0A837FFL2) | Enterobacter hormaechei subsp. xiangfangensis | |
| 16 | P (J) | Small ribosomal subunit protein uS10 | polymer | 103 | 11787.6 | 1 | UniProt (A3N357) | Enterobacter hormaechei subsp. xiangfangensis | 30S ribosomal protein S10 |
| 17 | Q (K) | Small ribosomal subunit protein uS11 | polymer | 129 | 13857.9 | 1 | UniProt (A0A837F5X1) | Enterobacter hormaechei subsp. xiangfangensis | |
| 18 | R (L) | Small ribosomal subunit protein uS12 | polymer | 124 | 13814.2 | 1 | UniProt (A0A837FLX6) | Enterobacter hormaechei subsp. xiangfangensis | |
| 19 | S (M) | Small ribosomal subunit protein uS13 | polymer | 118 | 13190.5 | 1 | UniProt (A0A837F3J7) | Enterobacter hormaechei subsp. xiangfangensis | |
| 20 | T (N) | Small ribosomal subunit protein uS14 | polymer | 101 | 11478.4 | 1 | UniProt (A0A837F5Y9) | Enterobacter hormaechei subsp. xiangfangensis | |
| 21 | U (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10217.8 | 1 | UniProt (A0A837FB29) | Enterobacter hormaechei subsp. xiangfangensis | |
| 22 | V (P) | Small ribosomal subunit protein bS16 | polymer | 82 | 9093.4 | 1 | UniProt (A0A837FG20) | Enterobacter hormaechei subsp. xiangfangensis | |
| 23 | W (Q) | Small ribosomal subunit protein uS17 | polymer | 84 | 9754.5 | 1 | UniProt (A0A837FBU4) | Enterobacter hormaechei subsp. xiangfangensis | |
| 24 | X (R) | Small ribosomal subunit protein bS18 | polymer | 75 | 9005.5 | 1 | UniProt (A8AMJ6) | Enterobacter hormaechei subsp. xiangfangensis | 30S ribosomal protein S18 |
| 25 | Y (S) | Small ribosomal subunit protein uS19 | polymer | 92 | 10455.4 | 1 | UniProt (A0A837F8Q3) | Enterobacter hormaechei subsp. xiangfangensis | |
| 26 | Z (T) | Small ribosomal subunit protein bS20 | polymer | 87 | 9679.4 | 1 | UniProt (A0A837F5N6) | Enterobacter hormaechei subsp. xiangfangensis | |
| 27 | AA (V) | tRNA | polymer | 77 | 24832.9 | 1 | GenBank (CP047127.1) | Escherichia coli | |
| 28 | BA (W) | Non Stop mRNA | polymer | 15 | 4952.0 | 1 | Escherichia coli | ||
| 29 | CA (X) | Ribosome hibernation promoting factor | polymer | 95 | 10859.4 | 1 | UniProt (A0A837FEX6) | Enterobacter hormaechei subsp. xiangfangensis | Hibernation factor HPF |
| 30 | DA (a) | 23S rRNA (2904-MER) | polymer | 2904 | 941862.7 | 1 | Enterobacter hormaechei subsp. xiangfangensis | ||
| 31 | EA (b) | 5s rRNA (120-MER) | polymer | 116 | 37466.3 | 1 | Enterobacter hormaechei subsp. xiangfangensis | ||
| 32 | FA (c) | Large ribosomal subunit protein uL2 | polymer | 273 | 29883.6 | 1 | UniProt (A0AAU7FUA8) | Enterobacter hormaechei subsp. xiangfangensis | |
| 33 | GA (d) | Large ribosomal subunit protein uL3 | polymer | 209 | 22301.5 | 1 | UniProt (A0A837FAM3) | Enterobacter hormaechei subsp. xiangfangensis | |
| 34 | HA (e) | Large ribosomal subunit protein uL4 | polymer | 201 | 22121.6 | 1 | UniProt (A0A837F567) | Enterobacter hormaechei subsp. xiangfangensis | |
| 35 | IA (f) | Large ribosomal subunit protein uL5 | polymer | 179 | 20314.5 | 1 | UniProt (A0A837F3L4) | Enterobacter hormaechei subsp. xiangfangensis | |
| 36 | JA (g) | Large ribosomal subunit protein uL6 | polymer | 177 | 18841.8 | 1 | UniProt (A0A837F7D4) | Enterobacter hormaechei subsp. xiangfangensis | |
| 37 | KA (h) | Large ribosomal subunit protein bL9 | polymer | 149 | 15658.9 | 1 | UniProt (A0A837FJN3) | Enterobacter hormaechei subsp. xiangfangensis | |
| 38 | LA (i) | Large ribosomal subunit protein uL13 | polymer | 142 | 16082.6 | 1 | UniProt (A0A837FGW4) | Enterobacter hormaechei subsp. xiangfangensis | |
| 39 | MA (j) | Large ribosomal subunit protein uL14 | polymer | 123 | 13579.1 | 1 | UniProt (A0A837FAL0) | Enterobacter hormaechei subsp. xiangfangensis | |
| 40 | NA (k) | Large ribosomal subunit protein uL15 | polymer | 144 | 14979.4 | 1 | UniProt (A0A837FBS7) | Enterobacter hormaechei subsp. xiangfangensis | |
| 41 | OA (l) | Large ribosomal subunit protein uL16 | polymer | 136 | 15311.2 | 1 | UniProt (A0A837F8H6) | Enterobacter hormaechei subsp. xiangfangensis | |
| 42 | PA (m) | Large ribosomal subunit protein bL17 | polymer | 127 | 14393.7 | 1 | UniProt (A0A837FA70) | Enterobacter hormaechei subsp. xiangfangensis | |
| 43 | QA (n) | Large ribosomal subunit protein uL18 | polymer | 117 | 12768.6 | 1 | UniProt (A0A837FA85) | Enterobacter hormaechei subsp. xiangfangensis | |
| 44 | RA (o) | Large ribosomal subunit protein bL19 | polymer | 115 | 13159.3 | 1 | UniProt (A0A837FH60) | Enterobacter hormaechei subsp. xiangfangensis | |
| 45 | SA (p) | Large ribosomal subunit protein bL20 | polymer | 118 | 13528.0 | 1 | UniProt (A0A837FGT8) | Enterobacter hormaechei subsp. xiangfangensis | |
| 46 | TA (q) | Large ribosomal subunit protein bL21 | polymer | 103 | 11572.3 | 1 | UniProt (A0A837F7Z5) | Enterobacter hormaechei subsp. xiangfangensis | |
| 47 | UA (r) | Large ribosomal subunit protein uL22 | polymer | 110 | 12222.3 | 1 | UniProt (A0A837F7E2) | Enterobacter hormaechei subsp. xiangfangensis | |
| 48 | VA (s) | Large ribosomal subunit protein uL23 | polymer | 100 | 11236.2 | 1 | UniProt (A0A837F3M5) | Enterobacter hormaechei subsp. xiangfangensis | |
| 49 | WA (t) | Large ribosomal subunit protein uL24 | polymer | 104 | 11339.3 | 1 | UniProt (A0A837F549) | Enterobacter hormaechei subsp. xiangfangensis | |
| 50 | XA (u) | Large ribosomal subunit protein bL25 | polymer | 94 | 10585.2 | 1 | UniProt (A0A837FJW0) | Enterobacter hormaechei subsp. xiangfangensis | |
| 51 | YA (v) | Large ribosomal subunit protein bL27 | polymer | 85 | 9147.5 | 1 | UniProt (A0A837FA76) | Enterobacter hormaechei subsp. xiangfangensis | |
| 52 | ZA (w) | Large ribosomal subunit protein bL28 | polymer | 78 | 9043.6 | 1 | UniProt (A0A837FGZ6) | Enterobacter hormaechei subsp. xiangfangensis | |
| 53 | AB (x) | Large ribosomal subunit protein uL29 | polymer | 63 | 7255.5 | 1 | UniProt (A0A837F4G7) | Enterobacter hormaechei subsp. xiangfangensis | |
| 54 | BB (y) | Large ribosomal subunit protein uL30 | polymer | 59 | 6602.9 | 1 | UniProt (A0A837F4E7) | Enterobacter hormaechei subsp. xiangfangensis | |
| 55 | CB (z) | Large ribosomal subunit protein bL32 | polymer | 57 | 6477.5 | 1 | UniProt (A0A837FLN8) | Enterobacter hormaechei subsp. xiangfangensis | |
| 56 | DB, EB (3, 4) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) PubChem (32051) | |||
| 57 | AC, AD, AE, AH, AI... (A, a, p, z, b...) | MAGNESIUM ION | non-polymer | 24.3 | 357 | Chemie (MG) PubChem (888) | |||
| 58 | AF, AG, AR, AS, AT... (A, a, f, b, c...) | POTASSIUM ION | non-polymer | 39.1 | 162 | Chemie (K) PubChem (813) |
Sequence modifications
K: 1 - 129 (UniProt: A0A837F5X1)
| PDB | External Database | Details |
|---|---|---|
| Ias 119 | Asn 119 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 55 |
| Total formula weight | 2191904.6 | |
| Non-Polymers* | Number of molecules | 521 |
| Total formula weight | 15141.6 | |
| All* | Total formula weight | 2207046.2 |
