9SR5
Crystal Structure of the NlpC/P60 Peptidase YkfC from Bacillus subtilis
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Gamma-D-glutamyl-L-lysine dipeptidyl-peptidase | polymer | 311 | 35034.0 | 1 | UniProt (O35010) Pfam (PF23795) Pfam (PF00877) | Bacillus subtilis subsp. subtilis str. 168 | Cell wall endopeptidase YkfC |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) PubChem (32051) | |||
| 3 | C, D (A) | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | non-polymer | 207.3 | 2 | Chemie (NHE) PubChem (66898) | |||
| 4 | E, F, G, H (A) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 5 | I, J, K, L, M (A) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) PubChem (753) | |||
| 6 | N (A) | water | water | 18.0 | 24 | Chemie (HOH) |
Sequence modifications
A: 1 - 296 (UniProt: O35010)
| PDB | External Database | Details |
|---|---|---|
| Glu 297 | - | expression tag |
| Asn 298 | - | expression tag |
| Leu 299 | - | expression tag |
| Tyr 300 | - | expression tag |
| Phe 301 | - | expression tag |
| Gln 302 | - | expression tag |
| Gly 303 | - | expression tag |
| Leu 304 | - | expression tag |
| Glu 305 | - | expression tag |
| His 306 | - | expression tag |
| His 307 | - | expression tag |
| His 308 | - | expression tag |
| His 309 | - | expression tag |
| His 310 | - | expression tag |
| His 311 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 35034.0 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 1324.7 | |
| All* | Total formula weight | 36358.7 |






