9SL7
Model of M. pneumoniae 70S transertion-like (stable RNAP)
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | Large ribosomal subunit protein bL34 | polymer | 47 | 5459.6 | 1 | UniProt (P78006) Pfam (PF00468) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L34 |
| 2 | B (1) | 50S ribosomal protein L35 | polymer | 59 | 6793.1 | 1 | UniProt (P75447) Pfam (PF01632) | Mycoplasmoides pneumoniae M129 | |
| 3 | C (2) | 50S ribosomal protein L36 | polymer | 37 | 4400.5 | 1 | UniProt (P52864) Pfam (PF00444) | Mycoplasmoides pneumoniae M129 | |
| 4 | D (3) | 23S ribosomal RNA | polymer | 2878 | 931587.5 | 1 | Mycoplasmoides pneumoniae M129 | ||
| 5 | E (4) | 5S ribosomal RNA | polymer | 105 | 33878.2 | 1 | Mycoplasmoides pneumoniae M129 | ||
| 6 | F (5) | 16S ribosomal RNA | polymer | 1493 | 482711.7 | 1 | Mycoplasmoides pneumoniae M129 | ||
| 7 | G, M (6, AB) | DNA-directed RNA polymerase subunit alpha | polymer | 327 | 36709.5 | 2 | UniProt (Q50295) Pfam (PF01193) Pfam (PF01000) Pfam (PF03118) | Mycoplasmoides pneumoniae M129 | RNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha |
| 8 | H (7) | tRNA-Phe | polymer | 76 | 24470.5 | 1 | GenBank (3042778399) | Mycoplasmoides pneumoniae M129 | |
| 9 | I (8) | SecDF | polymer | 944 | 105125.9 | 1 | UniProt (P75387) | Mycoplasmoides pneumoniae M129 | |
| 10 | J (9) | DNA-directed RNA polymerase subunit beta | polymer | 1391 | 155819.0 | 1 | UniProt (P78013) Pfam (PF00562) Pfam (PF04560) Pfam (PF04563) Pfam (PF04565) Pfam (PF10385) | Mycoplasmoides pneumoniae M129 | RNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta |
| 11 | K (A) | Small ribosomal subunit protein uS2 | polymer | 240 | 27362.7 | 1 | UniProt (P75560) Pfam (PF00318) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S2 |
| 12 | L (AA) | Probable DNA-directed RNA polymerase subunit delta | polymer | 89 | 10891.4 | 1 | UniProt (P75090) Pfam (PF05066) | Mycoplasmoides pneumoniae M129 | RNAP delta factor |
| 13 | N (AC) | Transcription termination/antitermination protein NusA | polymer | 366 | 41063.9 | 1 | UniProt (P75591) Pfam (PF08529) Pfam (PF13184) Pfam (PF26594) | Mycoplasmoides pneumoniae M129 | |
| 14 | O (AD) | DNA chain A | polymer | 32 | 9927.4 | 1 | Mycoplasmoides pneumoniae M129 | ||
| 15 | P (AE) | DNA chain B | polymer | 32 | 9749.3 | 1 | Mycoplasmoides pneumoniae M129 | ||
| 16 | Q (AF) | Transcription termination/antitermination protein NusG | polymer | 160 | 18151.1 | 1 | UniProt (P75049) Pfam (PF02357) | Mycoplasmoides pneumoniae M129 | |
| 17 | R (B) | Small ribosomal subunit protein uS3 | polymer | 215 | 24163.0 | 1 | UniProt (P41205) Pfam (PF07650) Pfam (PF00189) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S3 |
| 18 | S (C) | Small ribosomal subunit protein uS4 | polymer | 203 | 23589.3 | 1 | UniProt (P46775) Pfam (PF00163) Pfam (PF01479) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S4 |
| 19 | T (D) | Small ribosomal subunit protein uS5 | polymer | 153 | 16715.7 | 1 | UniProt (Q50301) Pfam (PF00333) Pfam (PF03719) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S5 |
| 20 | U (E) | Small ribosomal subunit protein bS6 | polymer | 167 | 19352.9 | 1 | UniProt (P75543) Pfam (PF01250) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S6 |
| 21 | V (F) | Small ribosomal subunit protein uS7 | polymer | 154 | 17765.8 | 1 | UniProt (P75545) Pfam (PF00177) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S7 |
| 22 | W (G) | Small ribosomal subunit protein uS8 | polymer | 141 | 15771.9 | 1 | UniProt (Q50304) Pfam (PF00410) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S8 |
| 23 | X (H) | Small ribosomal subunit protein uS9 | polymer | 128 | 14603.0 | 1 | UniProt (P75179) Pfam (PF00380) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S9 |
| 24 | Y (I) | Small ribosomal subunit protein uS10 | polymer | 101 | 11524.8 | 1 | UniProt (P75581) Pfam (PF00338) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S10 |
| 25 | Z (J) | Small ribosomal subunit protein uS11 | polymer | 114 | 11877.7 | 1 | UniProt (Q50296) Pfam (PF00411) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S11 |
| 26 | AA (K) | Small ribosomal subunit protein uS12 | polymer | 136 | 15319.1 | 1 | UniProt (P75546) Pfam (PF00164) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S12 |
| 27 | BA (L) | Small ribosomal subunit protein uS13 | polymer | 118 | 13520.7 | 1 | UniProt (Q50297) Pfam (PF00416) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S13 |
| 28 | CA (M) | Small ribosomal subunit protein uS14 | polymer | 60 | 6770.2 | 1 | UniProt (Q50305) Pfam (PF00253) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S14 type Z |
| 29 | DA (N) | Small ribosomal subunit protein uS15 | polymer | 83 | 9576.2 | 1 | UniProt (P75173) Pfam (PF00312) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S15 |
| 30 | EA (O) | Small ribosomal subunit protein bS16 | polymer | 80 | 9190.8 | 1 | UniProt (P75131) Pfam (PF00886) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S16 |
| 31 | FA (P) | Small ribosomal subunit protein uS17 | polymer | 83 | 9599.3 | 1 | UniProt (Q50309) Pfam (PF00366) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S17 |
| 32 | GA (Q) | Small ribosomal subunit protein bS18 | polymer | 65 | 7631.1 | 1 | UniProt (P75541) Pfam (PF01084) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S18 |
| 33 | HA (R) | Small ribosomal subunit protein uS19 | polymer | 84 | 9682.2 | 1 | UniProt (P75576) Pfam (PF00203) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S19 |
| 34 | IA (S) | Small ribosomal subunit protein bS20 | polymer | 77 | 8977.4 | 1 | UniProt (P75237) Pfam (PF01649) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S20 |
| 35 | JA (T) | Small ribosomal subunit protein bS21 | polymer | 53 | 6724.1 | 1 | UniProt (P57079) | Mycoplasmoides pneumoniae M129 | 30S ribosomal protein S21 |
| 36 | KA (U) | 50S ribosomal protein L10 | polymer | 161 | 17645.7 | 1 | UniProt (P75240) Pfam (PF00466) | Mycoplasmoides pneumoniae M129 | |
| 37 | LA, MA, NA, OA (V, W, X, Y) | Large ribosomal subunit protein bL12 | polymer | 29 | 3340.8 | 4 | UniProt (P75239) Pfam (PF16320) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L7/L12 |
| 38 | PA (Z) | DNA-directed RNA polymerase subunit beta' | polymer | 1276 | 143333.9 | 1 | UniProt (P75271) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) | Mycoplasmoides pneumoniae M129 | RNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta' |
| 39 | QA (a) | Large ribosomal subunit protein uL2 | polymer | 285 | 31672.5 | 1 | UniProt (P75577) Pfam (PF00181) Pfam (PF03947) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L2 |
| 40 | RA (b) | Large ribosomal subunit protein uL3 | polymer | 229 | 25067.9 | 1 | UniProt (P75580) Pfam (PF00297) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L3 |
| 41 | SA (c) | Large ribosomal subunit protein uL4 | polymer | 210 | 23372.2 | 1 | UniProt (P75579) Pfam (PF00573) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L4 |
| 42 | TA (d) | Large ribosomal subunit protein uL5 | polymer | 175 | 19740.2 | 1 | UniProt (Q50306) Pfam (PF00281) Pfam (PF00673) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L5 |
| 43 | UA (e) | Large ribosomal subunit protein uL6 | polymer | 176 | 19789.1 | 1 | UniProt (Q50303) Pfam (PF00347) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L6 |
| 44 | VA (f) | Large ribosomal subunit protein bL9 | polymer | 145 | 16785.6 | 1 | UniProt (P75540) Pfam (PF01281) Pfam (PF03948) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L9 |
| 45 | WA (h) | Large ribosomal subunit protein uL11 | polymer | 128 | 13741.3 | 1 | UniProt (P75550) Pfam (PF03946) Pfam (PF00298) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L11 |
| 46 | XA (i) | Large ribosomal subunit protein uL13 | polymer | 144 | 16562.2 | 1 | UniProt (P75178) Pfam (PF00572) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L13 |
| 47 | YA (j) | 50S ribosomal protein L14 | polymer | 122 | 13478.9 | 1 | UniProt (Q50308) Pfam (PF00238) | Mycoplasmoides pneumoniae M129 | |
| 48 | ZA (k) | Large ribosomal subunit protein uL15 | polymer | 148 | 16379.3 | 1 | UniProt (Q50300) Pfam (PF00828) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L15 |
| 49 | AB (l) | Large ribosomal subunit protein uL16 | polymer | 136 | 15389.2 | 1 | UniProt (P41204) Pfam (PF00252) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L16 |
| 50 | BB (m) | Large ribosomal subunit protein bL17 | polymer | 119 | 13646.9 | 1 | UniProt (Q59547) Pfam (PF01196) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L17 |
| 51 | CB (n) | Large ribosomal subunit protein uL18 | polymer | 116 | 13073.3 | 1 | UniProt (Q50302) Pfam (PF00861) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L18 |
| 52 | DB (o) | Large ribosomal subunit protein bL19 | polymer | 115 | 13352.6 | 1 | UniProt (P75133) Pfam (PF01245) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L19 |
| 53 | EB (p) | Large ribosomal subunit protein bL20 | polymer | 114 | 13464.0 | 1 | UniProt (P78023) Pfam (PF00453) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L20 |
| 54 | FB (q) | Large ribosomal subunit protein bL21 | polymer | 99 | 11549.7 | 1 | UniProt (P78026) Pfam (PF00829) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L21 |
| 55 | GB (r) | Large ribosomal subunit protein uL22 | polymer | 139 | 15328.0 | 1 | UniProt (P75575) Pfam (PF00237) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L22 |
| 56 | HB (s) | Large ribosomal subunit protein uL23 | polymer | 92 | 10231.3 | 1 | UniProt (P75578) Pfam (PF00276) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L23 |
| 57 | IB (t) | 50S ribosomal protein L24 | polymer | 111 | 12461.9 | 1 | UniProt (Q50307) Pfam (PF00467) Pfam (PF17136) | Mycoplasmoides pneumoniae M129 | |
| 58 | JB (u) | Large ribosomal subunit protein bL27 | polymer | 86 | 9363.8 | 1 | UniProt (P75458) Pfam (PF01016) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L27 |
| 59 | KB (v) | Large ribosomal subunit protein bL28 | polymer | 63 | 7331.6 | 1 | UniProt (P75171) Pfam (PF00830) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L28 |
| 60 | LB (w) | Large ribosomal subunit protein uL29 | polymer | 108 | 12613.8 | 1 | UniProt (Q50310) Pfam (PF00831) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L29 |
| 61 | MB (x) | Large ribosomal subunit protein bL31 | polymer | 44 | 4936.7 | 1 | UniProt (P78020) Pfam (PF01197) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L31 |
| 62 | NB (y) | Large ribosomal subunit protein bL32 | polymer | 56 | 6510.7 | 1 | UniProt (P75238) Pfam (PF01783) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L32 |
| 63 | OB (z) | Large ribosomal subunit protein bL33A | polymer | 50 | 5881.0 | 1 | UniProt (P78015) Pfam (PF00471) | Mycoplasmoides pneumoniae M129 | 50S ribosomal protein L33 1 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 67 |
| Total formula weight | 2729232.8 | |
| All* | Total formula weight | 2729232.8 |
