9SIN
Phage epsilon15 tailspike gp20 containing domains beta-helix, beta-sandwich and petal domains with three hexasaccharides of the Salmonella Anatum O-antigen
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Tail spike protein | polymer | 857 | 92309.8 | 1 | UniProt (Q858F5) | Salmonella phage epsilon15 | TSP,Endorhamnosidase,Gene product 20,gp20 |
| 2 | B (B) | 6-O-acetyl-alpha-D-galactopyranose-(1-6)-beta-D-mannopyranose-(1-4)-alpha-L-rhamnopyranose-(1-3)-6-O-acetyl-alpha-D-galactopyranose-(1-6)-beta-D-mannopyranose-(1-4)-alpha-L-rhamnopyranose | branched | 1042.9 | 1 | ||||
| 3 | C, D (D, E) | alpha-D-galactopyranose-(1-6)-beta-D-mannopyranose-(1-4)-alpha-L-rhamnopyranose-(1-3)-alpha-D-galactopyranose-(1-6)-beta-D-mannopyranose-(1-4)-alpha-L-rhamnopyranose | branched | 958.9 | 2 | In PDB GlyTouCan (G22621DJ) | |||
| 4 | E, F, G, H, I... (A) | FORMIC ACID | non-polymer | 46.0 | 15 | Chemie (FMT) PubChem (284) | |||
| 5 | T, U (A) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) PubChem (923) | |||
| 6 | V (A) | water | water | 18.0 | 629 | Chemie (HOH) |
Sequence modifications
A: 248 - 1070 (UniProt: Q858F5)
| PDB | External Database | Details |
|---|---|---|
| Met 214 | - | initiating methionine |
| Gly 215 | - | expression tag |
| Ser 216 | - | expression tag |
| Ser 217 | - | expression tag |
| His 218 | - | expression tag |
| His 219 | - | expression tag |
| His 220 | - | expression tag |
| His 221 | - | expression tag |
| His 222 | - | expression tag |
| His 223 | - | expression tag |
| Ser 224 | - | expression tag |
| Ser 225 | - | expression tag |
| Gly 226 | - | expression tag |
| Leu 227 | - | expression tag |
| Val 228 | - | expression tag |
| Pro 229 | - | expression tag |
| Arg 230 | - | expression tag |
| Gly 231 | - | expression tag |
| Ser 232 | - | expression tag |
| His 233 | - | expression tag |
| Met 234 | - | expression tag |
| Ala 235 | - | expression tag |
| Ser 236 | - | expression tag |
| Met 237 | - | expression tag |
| Thr 238 | - | expression tag |
| Gly 239 | - | expression tag |
| Gly 240 | - | expression tag |
| Gln 241 | - | expression tag |
| Gln 242 | - | expression tag |
| Met 243 | - | expression tag |
| Gly 244 | - | expression tag |
| Arg 245 | - | expression tag |
| Ile 246 | - | expression tag |
| Leu 247 | - | expression tag |
| Ile 308 | Cys 308 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 92309.8 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 2960.7 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 736.4 | |
| All* | Total formula weight | 96006.8 |
