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9SFJ

E.coli cytochrome bd-I dimer in the MK bound open and closed state

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, a)
Cytochrome bd-I ubiquinol oxidase subunit 1polymer52258251.72UniProt (P0ABJ9)
Pfam (PF01654)
Escherichia coli K-12Cytochrome bd-I oxidase subunit I,Cytochrome d ubiquinol oxidase subunit I
2B, F
(B, b)
Cytochrome bd-I ubiquinol oxidase subunit 2polymer37942479.82UniProt (P0ABK2)
Pfam (PF02322)
Escherichia coli K-12Cytochrome bd-I oxidase subunit II,Cytochrome d ubiquinol oxidase subunit II
3C, G
(H, h)
Cytochrome bd-I ubiquinol oxidase CydH (Uncharacterized protein YnhF)polymer292999.72UniProt (A5A618)Escherichia coli K-12
4D, H
(X, x)
Cytochrome bd-I ubiquinol oxidase subunit Xpolymer374043.72UniProt (P56100)
Pfam (PF08173)
Escherichia coli K-12Cytochrome bd-I oxidase subunit X,Cytochrome d ubiquinol oxidase subunit X
5I, L, Q, S
(A, a)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
6J, W
(A, a)
TRANS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONEnon-polymer636.52Chemie (A1JN4)
7AA, K, O, R, V...
(x, A, B, a, b)
2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATEnon-polymer648.96Chemie (LPP)
PubChem (446066)
8M, P, T, Z
(A, B, a, b)
Ubiquinone-8non-polymer727.14Chemie (UQ8)
PubChem (5283546)
9N, U
(A, a)
MENAQUINONE 8non-polymer717.12Chemie (MQ8)
PubChem (5288843)
10X
(a)
OXYGEN MOLECULEnon-polymer32.01Chemie (OXY)
PubChem (977)
11BA, CA, DA, EA
(A, B, a, b)
waterwater18.09Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight215549.7
Non-Polymers*Number of molecules19
Total formula weight12007.0
All*Total formula weight227556.7
*Water molecules are not included.

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PDB entries from 2026-05-27

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