9S88
Amuc0121_S1_15 in complex with O6 sulfated Lewis A antigen (6'S-LeA)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E (A, B, C, D, E) | Sulfatase | polymer | 496 | 54466.9 | 5 | UniProt (B2ULS2) Pfam (PF00884) | Akkermansia muciniphila ATCC BAA-835 | |
| 2 | F, G, H, I, J (I, J, K, L, M) | 6-O-sulfo-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose | branched | 609.6 | 5 | In PDB | |||
| 3 | K, T (A, E) | IODIDE ION | non-polymer | 126.9 | 2 | Chemie (IOD) PubChem (30165) | |||
| 4 | L, O, Q, R, U... (A, C, D, E) | BROMIDE ION | non-polymer | 79.9 | 6 | Chemie (BR) PubChem (259) | |||
| 5 | M, N, P, S, W (A, B, C, D, E) | CALCIUM ION | non-polymer | 40.1 | 5 | Chemie (CA) PubChem (271) | |||
| 6 | AA, BA, X, Y, Z (D, E, A, B, C) | water | water | 18.0 | 363 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E: 25 - 520 (UniProt: B2ULS2)
| PDB | External Database | Details |
|---|---|---|
| Ser 78 | Cys 78 | conflict |
| Lys 237 | Arg 237 | conflict |
| Val 249 | Ile 249 | conflict |
| Ser 512 | Pro 512 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 272334.3 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 3047.8 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 933.6 | |
| All* | Total formula weight | 276315.6 |
