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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9S6P

Local refinement of a PSI monomer of A. marina NIES-2412

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(B)		Photosystem I P700 chlorophyll a apoprotein A2polymer73382083.21UniProt (A0AAT9GV97)Acaryochloris marina NIES-2412PsaB
2B
(D)		Photosystem I reaction center subunit IIpolymer13915125.11UniProt (A0AAT9GVK4)Acaryochloris marina NIES-2412
3C
(E)		Photosystem I reaction center subunit IVpolymer869350.71UniProt (A0AAT9GVJ0)Acaryochloris marina NIES-2412
4D
(I)		Psa27 proteinpolymer343648.31UniProt (A0AAT9GVM8)Acaryochloris marina NIES-2412
5E
(J)		Photosystem I reaction center subunit IXpolymer475457.41UniProt (B0C7S6)Acaryochloris marina NIES-2412
6F
(K)		Photosystem I reaction center subunit PsaKpolymer868894.51UniProt (A0AAT9GVI7)Acaryochloris marina NIES-2412Photosystem I subunit X
7G
(L)		PsaLpolymer15315588.01Acaryochloris marina
8H
(M)		PsaMpolymer313204.91Acaryochloris marina
9I
(X)		PsaX2polymer272973.61Acaryochloris marina
10J
(A)		Photosystem I P700 chlorophyll a apoprotein A1polymer75383573.81UniProt (A0AAT9GVI9)Acaryochloris marina NIES-2412PsaA
11K
(C)		Photosystem I iron-sulfur centerpolymer818825.21UniProt (B0CB42)Acaryochloris marina NIES-24129 kDa polypeptide,PSI-C,Photosystem I subunit VII,PsaC
12L
(F)		Photosystem I reaction center subunit IIIpolymer16717691.41UniProt (A0AAT9GVR1)Acaryochloris marina NIES-2412PSI-F
13AA, AB, AD, BA, BD...
(B, A, F, I, J...)		CHLOROPHYLL Dnon-polymer895.593Chemie (CL7)
14GC, N
(A, B)		PHEOPHYTIN Anon-polymer871.22Chemie (PHO)
15BB, VD
(B, A)		PHYLLOQUINONEnon-polymer450.72Chemie (PQN)
PubChem (5284607)
16AC, AE, BC, CB, CE...
(L, A, B, F, I...)		(6'S)-beta,epsilon-carotenenon-polymer536.921Chemie (A1JPJ)
17IB
(B)		1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDEnon-polymer787.21Chemie (LMG)
PubChem (446441)
18DE, EE, MB
(C, B)		IRON/SULFUR CLUSTERnon-polymer351.63Chemie (SF4)
19CC, DC
(A)		1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLEnon-polymer723.02Chemie (LHG)
20EC
(A)		CHLOROPHYLL D ISOMERnon-polymer895.51Chemie (G9R)
21HE, IE, JE, KE, LE...
(B, I, J, L, A)		waterwater18.039Chemie (HOH)
Sequence modifications
B: 1 - 733 (UniProt: A0AAT9GV97)
PDBExternal DatabaseDetails
His 122Gln 122conflict
Thr 240Ala 240conflict
Ser 247Gly 247conflict
Val 258Met 258conflict
Glu 318Gln 318conflict
Ala 484Ser 484conflict
Ser 505Ala 505conflict
Ser 506Asn 506conflict
D: 1 - 139 (UniProt: A0AAT9GVK4)
PDBExternal DatabaseDetails
Ile 76Thr 76conflict
Gln 136Lys 136conflict
E: 1 - 86 (UniProt: A0AAT9GVJ0)
PDBExternal DatabaseDetails
Lys 29Gln 29conflict
Ala 73Gly 73conflict
Lys 74Gly 74conflict
Ala 75Lys 75conflict
-Pro 77deletion
-Ala 78deletion
-Ala 79deletion
J: 1 - 47 (UniProt: B0C7S6)
PDBExternal DatabaseDetails
Pro 2Leu 6conflict
Gln 3Lys 7conflict
Gly 9Asp 13conflict
Phe 22Leu 26conflict
K: 1 - 86 (UniProt: A0AAT9GVI7)
PDBExternal DatabaseDetails
Thr 19Ala 19conflict
Met 30Leu 30conflict
Ser 52Asn 52conflict
A: 1 - 753 (UniProt: A0AAT9GVI9)
PDBExternal DatabaseDetails
Asn 3Thr 3conflict
Cys 367Val 367conflict
Met 516Leu 516conflict
Ser 569Asn 569conflict
Thr 622Ser 622conflict
F: 1 - 167 (UniProt: A0AAT9GVR1)
PDBExternal DatabaseDetails
Val 9Leu 9conflict
Leu 11Met 11conflict
Gln 36Lys 36conflict
Glu 52Asn 52conflict
Arg 55Gln 55conflict
Ala 68Pro 68conflict
Asp 69Glu 69conflict
Leu 144Val 144conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight256416.0
Non-Polymers*Number of molecules125
Total formula weight101379.6
All*Total formula weight357795.6
*Water molecules are not included.

256158

PDB entries from 2026-07-08

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