9S3E
Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Pisum sativum
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Photosystem II protein D1 | polymer | 334 | 36972.1 | 1 | UniProt (P06585) | Pisum sativum (garden pea) | PSII D1 protein,32 kDa thylakoid membrane protein,Photosystem II Q(B) protein |
| 2 | B (B) | Photosystem II CP47 reaction center protein | polymer | 481 | 53157.6 | 1 | UniProt (D5MAL6) | Pisum sativum (garden pea) | PSII 47 kDa protein,Protein CP-47 |
| 3 | C (C) | Photosystem II CP43 reaction center protein | polymer | 449 | 49174.3 | 1 | UniProt (P06004) | Pisum sativum (garden pea) | PSII 43 kDa protein,Photosystem II 44 kDa chlorophyll apoprotein,Protein CP-43 |
| 4 | D (D) | Photosystem II D2 protein | polymer | 340 | 38106.5 | 1 | UniProt (P06006) | Pisum sativum (garden pea) | PSII D2 protein,Photosystem Q(A) protein |
| 5 | E (E) | Cytochrome b559 subunit alpha | polymer | 75 | 8624.7 | 1 | UniProt (P13554) | Pisum sativum (garden pea) | PSII reaction center subunit V |
| 6 | F (F) | Cytochrome b559 subunit beta | polymer | 30 | 3396.0 | 1 | UniProt (P62096) | Pisum sativum (garden pea) | PSII reaction center subunit VI |
| 7 | G (H) | Photosystem II reaction center protein H | polymer | 60 | 6455.6 | 1 | UniProt (Q9XQR3) | Pisum sativum (garden pea) | PSII-H,Photosystem II 10 kDa phosphoprotein,Photosystem II 9 kDa phosphoprotein |
| 8 | H (I) | Photosystem II reaction center protein I | polymer | 33 | 3769.5 | 1 | UniProt (A0A2S1CE74) | Pisum sativum (garden pea) | PSII-I,PSII 4.8 kDa protein |
| 9 | I (J) | Photosystem II reaction center protein J | polymer | 35 | 3598.3 | 1 | UniProt (P13555) | Pisum sativum (garden pea) | PSII-J |
| 10 | J (K) | Photosystem II reaction center protein K | polymer | 37 | 4287.2 | 1 | UniProt (D5MAJ8) | Pisum sativum (garden pea) | PSII-K |
| 11 | K (L) | Photosystem II reaction center protein L | polymer | 35 | 4137.7 | 1 | UniProt (P60147) | Pisum sativum (garden pea) | PSII-L |
| 12 | L (M) | Photosystem II reaction center protein M | polymer | 28 | 3066.8 | 1 | UniProt (P69529) | Pisum sativum (garden pea) | PSII-M |
| 13 | M (O) | Oxygen-evolving enhancer protein 1, chloroplastic | polymer | 248 | 26554.6 | 1 | UniProt (P14226) | Pisum sativum (garden pea) | OEE1,33 kDa subunit of oxygen evolving system of photosystem II,33 kDa thylakoid membrane protein,OEC 33 kDa subunit |
| 14 | N (P) | Oxygen-evolving enhancer protein 2, chloroplastic | polymer | 186 | 20287.5 | 1 | UniProt (P16059) | Pisum sativum (garden pea) | OEE2,23 kDa subunit of oxygen evolving system of photosystem II,23 kDa thylakoid membrane protein,OEC 23 kDa subunit |
| 15 | O (Q) | Oxygen-evolving enhancer protein 3 | polymer | 148 | 16398.9 | 1 | UniProt (Q7Y1T5) | Pisum sativum (garden pea) | |
| 16 | P (T) | Photosystem II reaction center protein T | polymer | 30 | 3462.2 | 1 | UniProt (Q8HS25) | Pisum sativum (garden pea) | PSII-T |
| 17 | Q (W) | PSII 6.1 kDa protein | polymer | 47 | 5198.9 | 1 | UniProt (A0A9D4W3H0) | Pisum sativum (garden pea) | |
| 18 | R (X) | Ultraviolet-B-repressible protein | polymer | 36 | 3544.1 | 1 | UniProt (A0A9D4X981) | Pisum sativum (garden pea) | |
| 19 | S (U) | Photosystem II 5 kDa protein, chloroplastic | polymer | 28 | 3080.6 | 1 | UniProt (A0A9D4VSA9) | Pisum sativum (garden pea) | |
| 20 | T (A) | CA-MN4-O5 CLUSTER | non-polymer | 339.8 | 1 | Chemie (OEX) | |||
| 21 | U (A) | FE (II) ION | non-polymer | 55.8 | 1 | Chemie (FE2) PubChem (27284) | |||
| 22 | V, W (A) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) PubChem (312) | |||
| 23 | AA, DB, EB, FA, FB... (A, C, B, D) | CHLOROPHYLL A | non-polymer | 893.5 | 35 | Chemie (CLA) | |||
| 24 | WB, Z (D, A) | PHEOPHYTIN A | non-polymer | 871.2 | 2 | Chemie (PHO) | |||
| 25 | BA, FC, HC, QB, VA... (A, H, I, C, B...) | BETA-CAROTENE | non-polymer | 536.9 | 8 | Chemie (BCR) PubChem (5280489) PubChem (86765360) PubChem (173398668) | |||
| 26 | CA (A) | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | non-polymer | 795.1 | 1 | Chemie (SQD) PubChem (25147486) | |||
| 27 | AC, DA (D, A) | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | non-polymer | 749.2 | 2 | Chemie (PL9) | |||
| 28 | EA (A) | BICARBONATE ION | non-polymer | 61.0 | 1 | Chemie (BCT) PubChem (769) | |||
| 29 | AB, DC, GC, JC, UB... (B, D, I, W, C) | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | non-polymer | 787.2 | 6 | Chemie (LMG) PubChem (446441) | |||
| 30 | BB, BC, CC, IC, KC... (B, D, L, W) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 6 | Chemie (LHG) | |||
| 31 | CB, RB, SB, TB (B, C) | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | non-polymer | 949.3 | 4 | Chemie (DGD) PubChem (15991538) | |||
| 32 | EC (E) | PROTOPORPHYRIN IX CONTAINING FE | non-polymer | 616.5 | 1 | Chemie (HEM) | |||
| 33 | AD, BD, CD, DD, LC... (T, W, X, U, A...) | water | water | 18.0 | 778 | Chemie (HOH) |
Sequence modifications
F: 10 - 39 (UniProt: P62096)
| PDB | External Database | Details |
|---|---|---|
| Phe 26 | Ser 26 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 19 |
| Total formula weight | 293273.0 | |
| Non-Polymers* | Number of molecules | 70 |
| Total formula weight | 53605.1 | |
| All* | Total formula weight | 346878.1 |
