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9S3D

NAC bound human RNC with 58 amino acid ARF1-linker

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(NA)
Nascent polypeptide-associated complex subunit alphapolymer21523406.81UniProt (Q13765)
Pfam (PF01849)
Pfam (PF19026)
Homo sapiens (human)NAC-alpha,Alpha-NAC
2B
(NB)
Isoform 2 of Transcription factor BTF3polymer16217724.01UniProt (P20290)
Pfam (PF01849)
Homo sapiens (human)Nascent polypeptide-associated complex subunit beta,NAC-beta,RNA polymerase B transcription factor 3
3C
(CM)
58 amino acid ARF1-linker - V5 peptide - hCMV staller mRNApolymer586188411.01Homo sapiens
4D
(CP)
prolyl-tRNApolymer7524189.31Homo sapiens
5E
(CR)
Eukaryotic peptide chain release factor subunit 1polymer43749107.71UniProt (P62495)
Pfam (PF03463)
Pfam (PF03464)
Pfam (PF03465)
Homo sapiens (human)Eukaryotic release factor 1,eRF1,Protein Cl1,TB3-1
6F
(CZ)
nascent chainpolymer9510363.41Homo sapiens
7G
(L5)
28S rRNApolymer50701640222.11GenBank (NR_003287)Homo sapiens (human)
8H
(L7)
5S rRNApolymer12138998.11GenBank (23898)Homo sapiens (human)
9I
(L8)
5.8S rRNApolymer15750449.81GenBank (555853)Homo sapiens (human)
10J
(LA)
60S ribosomal protein L8polymer25728088.91UniProt (P62917)
Pfam (PF00181)
Pfam (PF03947)
Homo sapiens (human)Large ribosomal subunit protein uL2
11K
(LB)
60S ribosomal protein L3polymer40346211.11UniProt (P39023)
Pfam (PF00297)
Homo sapiens (human)HIV-1 TAR RNA-binding protein B,TARBP-B,Large ribosomal subunit protein uL3
12L
(LC)
60S ribosomal protein L4polymer42747804.61UniProt (P36578)
Pfam (PF00573)
Pfam (PF14374)
Homo sapiens (human)60S ribosomal protein L1,Large ribosomal subunit protein uL4
13M
(LD)
60S ribosomal protein L5polymer29734426.81UniProt (P46777)
Pfam (PF14204)
Pfam (PF17144)
Homo sapiens (human)Large ribosomal subunit protein uL18
14N
(LE)
Large ribosomal subunit protein eL6polymer28832810.21UniProt (Q02878)
Pfam (PF03868)
Pfam (PF01159)
Homo sapiens (human)60S ribosomal protein L6,Neoplasm-related protein C140,Tax-responsive enhancer element-binding protein 107,TaxREB107
15O
(LF)
Large ribosomal subunit protein uL30polymer24829291.01UniProt (P18124)
Pfam (PF08079)
Pfam (PF00327)
Homo sapiens (human)60S ribosomal protein L7
16P
(LG)
60S ribosomal protein L7apolymer26630061.81UniProt (P62424)
Pfam (PF01248)
Homo sapiens (human)Large ribosomal subunit protein eL8,PLA-X polypeptide,Surfeit locus protein 3
17Q
(LH)
60S ribosomal protein L9polymer19221899.51UniProt (P32969)
Pfam (PF00347)
Homo sapiens (human)Large ribosomal subunit protein uL6
18R
(LI)
Ribosomal protein uL16-likepolymer21424570.91UniProt (Q96L21)
Pfam (PF00252)
Homo sapiens (human)60S ribosomal protein L10-like,Large ribosomal subunit protein uL16-like
19S
(LJ)
60S ribosomal protein L11polymer17820288.51UniProt (P62913)
Pfam (PF00281)
Pfam (PF00673)
Homo sapiens (human)CLL-associated antigen KW-12,Large ribosomal subunit protein uL5
20T
(LL)
60S ribosomal protein L13polymer21124321.71UniProt (P26373)
Pfam (PF01294)
Homo sapiens (human)Breast basic conserved protein 1,Large ribosomal subunit protein eL13
21U
(LM)
60S ribosomal protein L14polymer21523485.01UniProt (P50914)
Pfam (PF01929)
Homo sapiens (human)CAG-ISL 7,Large ribosomal subunit protein eL14
22V
(LN)
60S ribosomal protein L15polymer20424207.31UniProt (P61313)
Pfam (PF00827)
Homo sapiens (human)Large ribosomal subunit protein eL15
23W
(LO)
60S ribosomal protein L13apolymer20323633.41UniProt (P40429)
Pfam (PF00572)
Homo sapiens (human)23 kDa highly basic protein,Large ribosomal subunit protein uL13
24X
(LP)
60S ribosomal protein L17polymer18421443.21UniProt (P18621)
Pfam (PF00237)
Homo sapiens (human)60S ribosomal protein L23,Large ribosomal subunit protein uL22,PD-1
25Y
(LQ)
60S ribosomal protein L18polymer18821687.71UniProt (Q07020)
Pfam (PF17135)
Homo sapiens (human)Large ribosomal subunit protein eL18
26Z
(LR)
60S ribosomal protein L19polymer19623535.31UniProt (P84098)
Pfam (PF01280)
Pfam (PF25476)
Homo sapiens (human)Large ribosomal subunit protein eL19
27AA
(LS)
60S ribosomal protein L18apolymer17620808.51UniProt (Q02543)
Pfam (PF01775)
Homo sapiens (human)Large ribosomal subunit protein eL20
28BA
(LT)
60S ribosomal protein L21polymer16018610.01UniProt (P46778)
Pfam (PF01157)
Homo sapiens (human)Large ribosomal subunit protein eL21
29CA
(LU)
60S ribosomal protein L22polymer12814813.01UniProt (P35268)
Pfam (PF01776)
Homo sapiens (human)EBER-associated protein,EAP,Epstein-Barr virus small RNA-associated protein,Heparin-binding protein HBp15,Large ribosomal subunit protein eL22
30DA
(LV)
60S ribosomal protein L23polymer14014892.51UniProt (P62829)
Pfam (PF00238)
Homo sapiens (human)60S ribosomal protein L17,Large ribosomal subunit protein uL14
31EA
(LW)
60S ribosomal protein L24polymer15717825.11UniProt (P83731)
Pfam (PF01246)
Homo sapiens (human)60S ribosomal protein L30,Large ribosomal subunit protein eL24
32FA
(LX)
60S ribosomal protein L23apolymer15617740.21UniProt (P62750)
Pfam (PF03939)
Pfam (PF00276)
Homo sapiens (human)Large ribosomal subunit protein uL23
33GA
(LY)
60S ribosomal protein L26polymer14517303.41UniProt (P61254)
Pfam (PF16906)
Pfam (PF00467)
Homo sapiens (human)Large ribosomal subunit protein uL24
34HA
(LZ)
60S ribosomal protein L27polymer13615835.81UniProt (P61353)
Pfam (PF00467)
Pfam (PF01777)
Homo sapiens (human)Large ribosomal subunit protein eL27
35IA
(La)
60S ribosomal protein L27apolymer14816604.51UniProt (P46776)
Pfam (PF00828)
Homo sapiens (human)Large ribosomal subunit protein uL15
36JA
(Lb)
60S ribosomal protein L29polymer15917804.31UniProt (P47914)
Pfam (PF01779)
Homo sapiens (human)Cell surface heparin-binding protein HIP,Large ribosomal subunit protein eL29
37KA
(Lc)
60S ribosomal protein L30polymer11512805.11UniProt (P62888)
Pfam (PF01248)
Homo sapiens (human)Large ribosomal subunit protein eL30
38LA
(Ld)
60S ribosomal protein L31polymer12514494.91UniProt (P62899)
Pfam (PF01198)
Homo sapiens (human)Large ribosomal subunit protein eL31
39MA
(Le)
60S ribosomal protein L32polymer13515898.91UniProt (P62910)
Pfam (PF01655)
Homo sapiens (human)Large ribosomal subunit protein eL32
40NA
(Lf)
60S ribosomal protein L35apolymer11012564.71UniProt (P18077)
Pfam (PF01247)
Homo sapiens (human)Cell growth-inhibiting gene 33 protein,Large ribosomal subunit protein eL33
41OA
(Lg)
60S ribosomal protein L34polymer11713326.11UniProt (P49207)
Pfam (PF01199)
Homo sapiens (human)Large ribosomal subunit protein eL34
42PA
(Lh)
60S ribosomal protein L35polymer12314593.61UniProt (P42766)
Pfam (PF00831)
Homo sapiens (human)Large ribosomal subunit protein uL29
43QA
(Li)
60S ribosomal protein L36polymer10512290.91UniProt (Q9Y3U8)
Pfam (PF01158)
Homo sapiens (human)Large ribosomal subunit protein eL36
44RA
(Lj)
Large ribosomal subunit protein eL37polymer9711111.01UniProt (P61927)
Pfam (PF01907)
Homo sapiens (human)60S ribosomal protein L37,G1.16
45SA
(Lk)
60S ribosomal protein L38polymer708238.91UniProt (P63173)
Pfam (PF01781)
Homo sapiens (human)Large ribosomal subunit protein eL38
46TA
(Ll)
60S ribosomal protein L39polymer516426.81UniProt (P62891)
Pfam (PF00832)
Homo sapiens (human)Large ribosomal subunit protein eL39
47UA
(Lm)
Ubiquitin-60S ribosomal protein L40polymer12814758.41UniProt (P62987)
Pfam (PF00240)
Pfam (PF01020)
Homo sapiens (human)CEP52,Ubiquitin A-52 residue ribosomal protein fusion product 1
48VA
(Ln)
60S ribosomal protein L41polymer253473.51UniProt (P62945)
Pfam (PF05162)
Homo sapiens (human)HG12,Large ribosomal subunit protein eL41
49WA
(Lo)
60S ribosomal protein L36apolymer10612477.01UniProt (P83881)
Pfam (PF00935)
Homo sapiens (human)60S ribosomal protein L44,Cell growth-inhibiting gene 15 protein,Cell migration-inducing gene 6 protein,Large ribosomal subunit protein eL42
50XA
(Lp)
60S ribosomal protein L37apolymer9210299.41UniProt (P61513)
Pfam (PF01780)
Homo sapiens (human)Large ribosomal subunit protein eL43
51YA
(Lr)
60S ribosomal protein L28polymer13715784.61UniProt (P46779)
Pfam (PF01778)
Homo sapiens (human)Large ribosomal subunit protein eL28
52ZA
(Ls)
60S acidic ribosomal protein P0polymer31734309.41UniProt (P05388)
Pfam (PF00466)
Pfam (PF17777)
Pfam (PF00428)
Homo sapiens (human)60S ribosomal protein L10E,Large ribosomal subunit protein uL10
53AB
(Lt)
Large ribosomal subunit protein uL11polymer16517847.61UniProt (P30050)
Pfam (PF03946)
Pfam (PF00298)
Homo sapiens (human)60S ribosomal protein L12
54BB
(S2)
18S rRNApolymer1869602777.91GenBank (151415227)Homo sapiens (human)
55CB
(SA)
40S ribosomal protein SApolymer29532883.91UniProt (P08865)
Pfam (PF00318)
Pfam (PF16122)
Homo sapiens (human)37 kDa laminin receptor precursor,37LRP,37/67 kDa laminin receptor,LRP/LR,67 kDa laminin receptor,67LR,Colon carcinoma laminin-binding protein,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,Multidrug resistance-associated protein MGr1-Ag,NEM/1CHD4,Small ribosomal subunit protein uS2
56DB
(SB)
40S ribosomal protein S3apolymer26430002.11UniProt (P61247)
Pfam (PF01015)
Homo sapiens (human)Small ribosomal subunit protein eS1,v-fos transformation effector protein,Fte-1
57EB
(SC)
40S ribosomal protein S2polymer29331376.51UniProt (P15880)
Pfam (PF00333)
Pfam (PF03719)
Homo sapiens (human)40S ribosomal protein S4,Protein LLRep3,Small ribosomal subunit protein uS5
58FB
(SD)
40S ribosomal protein S3polymer24326729.41UniProt (P23396)
Pfam (PF07650)
Pfam (PF00189)
Homo sapiens (human)Small ribosomal subunit protein uS3
59GB
(SE)
Small ribosomal subunit protein eS4, X isoformpolymer26329654.91UniProt (P62701)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
Homo sapiens (human)40S ribosomal protein S4,SCR10,Single copy abundant mRNA protein
60HB
(SF)
40S ribosomal protein S5polymer20422913.51UniProt (P46782)
Pfam (PF00177)
Homo sapiens (human)Small ribosomal subunit protein uS7
61IB
(SG)
40S ribosomal protein S6polymer24928751.91UniProt (P62753)
Pfam (PF01092)
Homo sapiens (human)Phosphoprotein NP33,Small ribosomal subunit protein eS6
62JB
(SH)
40S ribosomal protein S7polymer19422168.91UniProt (P62081)
Pfam (PF01251)
Homo sapiens (human)Small ribosomal subunit protein eS7
63KB
(SI)
40S ribosomal protein S8polymer20824263.41UniProt (P62241)
Pfam (PF01201)
Homo sapiens (human)Small ribosomal subunit protein eS8
64LB
(SJ)
40S ribosomal protein S9polymer19422641.61UniProt (P46781)
Pfam (PF00163)
Pfam (PF01479)
Homo sapiens (human)Small ribosomal subunit protein uS4
65MB
(SK)
40S ribosomal protein S10polymer16518933.81UniProt (P46783)
Pfam (PF03501)
Homo sapiens (human)Small ribosomal subunit protein eS10
66NB
(SL)
40S ribosomal protein S11polymer15818468.81UniProt (P62280)
Pfam (PF16205)
Pfam (PF00366)
Homo sapiens (human)Small ribosomal subunit protein uS17
67OB
(SM)
40S ribosomal protein S12polymer13214539.01UniProt (P25398)
Pfam (PF01248)
Homo sapiens (human)Small ribosomal subunit protein eS12
68PB
(SN)
40S ribosomal protein S13polymer15117259.41UniProt (P62277)
Pfam (PF08069)
Pfam (PF00312)
Homo sapiens (human)Small ribosomal subunit protein uS15
69QB
(SO)
40S ribosomal protein S14polymer15116302.81UniProt (P62263)
Pfam (PF00411)
Homo sapiens (human)Small ribosomal subunit protein uS11
70RB
(SP)
40S ribosomal protein S15polymer14517076.21UniProt (P62841)
Pfam (PF00203)
Homo sapiens (human)RIG protein,Small ribosomal subunit protein uS19
71SB
(SQ)
40S ribosomal protein S16polymer14616477.41UniProt (P62249)
Pfam (PF00380)
Homo sapiens (human)Small ribosomal subunit protein uS9
72TB
(SR)
40S ribosomal protein S17polymer13515578.21UniProt (P08708)
Pfam (PF00833)
Homo sapiens (human)Small ribosomal subunit protein eS17
73UB
(SS)
40S ribosomal protein S18polymer15217759.81UniProt (P62269)
Pfam (PF00416)
Homo sapiens (human)Ke-3,Ke3,Small ribosomal subunit protein uS13
74VB
(ST)
40S ribosomal protein S19polymer14516091.61UniProt (P39019)
Pfam (PF01090)
Homo sapiens (human)Small ribosomal subunit protein eS19
75WB
(SU)
40S ribosomal protein S20polymer11913398.81UniProt (P60866)
Pfam (PF00338)
Homo sapiens (human)Small ribosomal subunit protein uS10
76XB
(SV)
40S ribosomal protein S21polymer839124.41UniProt (P63220)
Pfam (PF01249)
Homo sapiens (human)Small ribosomal subunit protein eS21
77YB
(SW)
40S ribosomal protein S15apolymer13014865.61UniProt (P62244)
Pfam (PF00410)
Homo sapiens (human)Small ribosomal subunit protein uS8
78ZB
(SX)
40S ribosomal protein S23polymer14315844.71UniProt (P62266)
Pfam (PF00164)
Homo sapiens (human)Small ribosomal subunit protein uS12
79AC
(SY)
40S ribosomal protein S24polymer13315463.31UniProt (P62847)
Pfam (PF01282)
Homo sapiens (human)Small ribosomal subunit protein eS24
80BC
(SZ)
40S ribosomal protein S25polymer12513776.21UniProt (P62851)
Pfam (PF03297)
Homo sapiens (human)Small ribosomal subunit protein eS25
81CC
(Sa)
40S ribosomal protein S26polymer11513047.51UniProt (P62854)
Pfam (PF01283)
Homo sapiens (human)Small ribosomal subunit protein eS26
82DC
(Sb)
40S ribosomal protein S27polymer849480.21UniProt (P42677)
Pfam (PF01667)
Homo sapiens (human)Metallopan-stimulin 1,MPS-1,Small ribosomal subunit protein eS27
83EC
(Sc)
40S ribosomal protein S28polymer697855.11UniProt (P62857)
Pfam (PF01200)
Homo sapiens (human)Small ribosomal subunit protein eS28
84FC
(Sd)
40S ribosomal protein S29polymer566690.81UniProt (P62273)
Pfam (PF00253)
Homo sapiens (human)Small ribosomal subunit protein uS14
85GC
(Se)
Ubiquitin-like FUBI-ribosomal protein eS30 fusion proteinpolymer13314415.71UniProt (P62861)
Pfam (PF00240)
Pfam (PF04758)
Homo sapiens (human)FAU ubiquitin like and ribosomal protein S30 fusion
86HC
(Sf)
Ubiquitinpolymer15618004.01UniProt (P62979)
Pfam (PF00240)
Pfam (PF01599)
Homo sapiens (human)
87IC
(Sg)
Receptor of activated protein C kinase 1polymer31735115.71UniProt (P63244)
Pfam (PF00400)
Homo sapiens (human)Cell proliferation-inducing gene 21 protein,Guanine nucleotide-binding protein subunit beta-2-like 1,Guanine nucleotide-binding protein subunit beta-like protein 12.3,Human lung cancer oncogene 7 protein,HLC-7,Receptor for activated C kinase,Small ribosomal subunit protein RACK1
88AD, AE, AF, AG, AH...
(L5, S2, L7, L8, LA...)
MAGNESIUM IONnon-polymer24.3191Chemie (MG)
89RH, SH, TH, UH, VH...
(Lg, Lj, Lm, Lo, Lp...)
ZINC IONnon-polymer65.48Chemie (ZN)
90AK, BK, CK, DK, EK...
(L5, L7, LI, LN, La...)
waterwater18.011Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains87
Total formula weight4153309.9
Non-Polymers*Number of molecules199
Total formula weight5165.5
All*Total formula weight4158475.4
*Water molecules are not included.

249697

PDB entries from 2026-02-25

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