9RVC
staphylococcus aureus 70S initiation complex with natural mRNA
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (0) | Large ribosomal subunit protein bL33B | polymer | 49 | 5885.8 | 1 | UniProt (Q2FY22) Pfam (PF00471) | Staphylococcus aureus | 50S ribosomal protein L33 2 |
| 2 | B (1) | Large ribosomal subunit protein bL34 | polymer | 45 | 5454.6 | 1 | UniProt (Q2FUQ0) Pfam (PF00468) | Staphylococcus aureus | 50S ribosomal protein L34 |
| 3 | C (2) | Large ribosomal subunit protein bL35 | polymer | 66 | 7722.4 | 1 | UniProt (Q2FXQ0) Pfam (PF01632) | Staphylococcus aureus | 50S ribosomal protein L35 |
| 4 | D (3) | Large ribosomal subunit protein bL36 | polymer | 37 | 4318.4 | 1 | UniProt (Q2FW29) Pfam (PF00444) | Staphylococcus aureus | 50S ribosomal protein L36 |
| 5 | E (4) | Large ribosomal subunit protein bL31B | polymer | 84 | 9737.9 | 1 | UniProt (Q2FWD8) Pfam (PF01197) | Staphylococcus aureus | 50S ribosomal protein L31 type B |
| 6 | F (A) | 16S rRNA | polymer | 1553 | 502324.5 | 1 | Staphylococcus aureus | ||
| 7 | G (B) | Small ribosomal subunit protein uS2 | polymer | 255 | 29136.4 | 1 | UniProt (Q2FZ25) Pfam (PF00318) | Staphylococcus aureus | 30S ribosomal protein S2 |
| 8 | H (C) | Small ribosomal subunit protein uS3 | polymer | 217 | 24143.9 | 1 | UniProt (Q2FW12) Pfam (PF07650) Pfam (PF00189) | Staphylococcus aureus | 30S ribosomal protein S3 |
| 9 | I (D) | Small ribosomal subunit protein uS4 | polymer | 200 | 23051.4 | 1 | UniProt (Q2FXK6) Pfam (PF01479) Pfam (PF00163) | Staphylococcus aureus | 30S ribosomal protein S4 |
| 10 | J (E) | Small ribosomal subunit protein uS5 | polymer | 166 | 17770.5 | 1 | UniProt (Q2FW23) Pfam (PF00333) Pfam (PF03719) | Staphylococcus aureus | 30S ribosomal protein S5 |
| 11 | K (F) | Small ribosomal subunit protein bS6 | polymer | 98 | 11613.1 | 1 | UniProt (Q2G113) Pfam (PF01250) | Staphylococcus aureus | 30S ribosomal protein S6 |
| 12 | L (G) | Small ribosomal subunit protein uS7 | polymer | 156 | 17826.6 | 1 | UniProt (P48940) Pfam (PF00177) | Staphylococcus aureus | 30S ribosomal protein S7 |
| 13 | M (H) | Small ribosomal subunit protein uS8 | polymer | 132 | 14854.3 | 1 | UniProt (Q2FW20) Pfam (PF00410) | Staphylococcus aureus | 30S ribosomal protein S8 |
| 14 | N (I) | Small ribosomal subunit protein uS9 | polymer | 132 | 14857.0 | 1 | UniProt (Q2FW39) Pfam (PF00380) | Staphylococcus aureus | 30S ribosomal protein S9 |
| 15 | O (J) | Large ribosomal subunit protein uL13 | polymer | 145 | 16359.4 | 1 | UniProt (Q2FW38) Pfam (PF00572) | Staphylococcus aureus | 50S ribosomal protein L13 |
| 16 | P (K) | Small ribosomal subunit protein uS11 | polymer | 129 | 13880.0 | 1 | UniProt (Q2FW31) Pfam (PF00411) | Staphylococcus aureus | 30S ribosomal protein S11 |
| 17 | Q (L) | Small ribosomal subunit protein uS12 | polymer | 137 | 15376.9 | 1 | UniProt (P0A0H0) Pfam (PF00164) | Staphylococcus aureus | 30S ribosomal protein S12 |
| 18 | R (M) | Small ribosomal subunit protein uS13 | polymer | 121 | 13747.9 | 1 | UniProt (Q2FW30) Pfam (PF00416) | Staphylococcus aureus | 30S ribosomal protein S13 |
| 19 | S (N) | Small ribosomal subunit protein uS14B | polymer | 61 | 7317.8 | 1 | UniProt (Q2FW19) Pfam (PF00253) | Staphylococcus aureus | 30S ribosomal protein S14 type Z |
| 20 | T (O) | Small ribosomal subunit protein uS15 | polymer | 89 | 10634.3 | 1 | UniProt (Q2G2Q1) Pfam (PF00312) | Staphylococcus aureus | 30S ribosomal protein S15 |
| 21 | U (P) | Small ribosomal subunit protein bS16 | polymer | 91 | 10253.9 | 1 | UniProt (Q2FZ45) Pfam (PF00886) | Staphylococcus aureus | 30S ribosomal protein S16 |
| 22 | V (Q) | Small ribosomal subunit protein uS17 | polymer | 87 | 10196.9 | 1 | UniProt (Q2FW15) Pfam (PF00366) | Staphylococcus aureus | 30S ribosomal protein S17 |
| 23 | W (R) | Small ribosomal subunit protein bS18 | polymer | 80 | 9332.0 | 1 | UniProt (Q2G111) Pfam (PF01084) | Staphylococcus aureus | 30S ribosomal protein S18 |
| 24 | X (S) | Small ribosomal subunit protein uS19 | polymer | 92 | 10639.3 | 1 | UniProt (Q2FW10) Pfam (PF00203) | Staphylococcus aureus | 30S ribosomal protein S19 |
| 25 | Y (T) | Small ribosomal subunit protein bS20 | polymer | 83 | 9012.4 | 1 | UniProt (Q2FXY6) Pfam (PF01649) | Staphylococcus aureus | 30S ribosomal protein S20 |
| 26 | Z (U) | Large ribosomal subunit protein uL14 | polymer | 122 | 13157.3 | 1 | UniProt (Q2FW16) Pfam (PF00238) | Staphylococcus aureus | 50S ribosomal protein L14 |
| 27 | AA (X) | spa mRNA | polymer | 23 | 7430.4 | 1 | Staphylococcus aureus | ||
| 28 | BA (Y) | A-site tRNA-Lys | polymer | 76 | 24377.4 | 1 | Escherichia coli | ||
| 29 | CA (Z) | P-site tRNA-Met | polymer | 76 | 24497.6 | 1 | Escherichia coli | ||
| 30 | DA (a) | 23S rRNA | polymer | 2914 | 943811.8 | 1 | Staphylococcus aureus | ||
| 31 | EA (b) | 5S | polymer | 114 | 36692.8 | 1 | Staphylococcus aureus | ||
| 32 | FA (c) | Large ribosomal subunit protein uL2 | polymer | 277 | 30217.2 | 1 | UniProt (P60430) Pfam (PF00181) Pfam (PF03947) | Staphylococcus aureus | 50S ribosomal protein L2 |
| 33 | GA (d) | Large ribosomal subunit protein uL3 | polymer | 220 | 23760.3 | 1 | UniProt (Q2FW06) Pfam (PF00297) | Staphylococcus aureus | 50S ribosomal protein L3 |
| 34 | HA (e) | Large ribosomal subunit protein uL4 | polymer | 207 | 22495.7 | 1 | UniProt (Q2FW07) Pfam (PF00573) | Staphylococcus aureus | 50S ribosomal protein L4 |
| 35 | IA (f) | Large ribosomal subunit protein uL5 | polymer | 179 | 20296.6 | 1 | UniProt (Q2FW18) Pfam (PF00281) Pfam (PF00673) | Staphylococcus aureus | 50S ribosomal protein L5 |
| 36 | JA (g) | Large ribosomal subunit protein uL6 | polymer | 178 | 19818.6 | 1 | UniProt (Q2FW21) Pfam (PF00347) | Staphylococcus aureus | 50S ribosomal protein L6 |
| 37 | KA (j) | Small ribosomal subunit protein uS10 | polymer | 102 | 11598.5 | 1 | UniProt (A6U3X6) | Staphylococcus aureus | 30S ribosomal protein S10 |
| 38 | LA (k) | Large ribosomal subunit protein uL15 | polymer | 146 | 15628.9 | 1 | UniProt (P0A0F8) Pfam (PF00828) | Staphylococcus aureus | 50S ribosomal protein L15 |
| 39 | MA (l) | Large ribosomal subunit protein uL16 | polymer | 144 | 16274.0 | 1 | UniProt (Q2FW13) Pfam (PF00252) | Staphylococcus aureus | 50S ribosomal protein L16 |
| 40 | NA (m) | Large ribosomal subunit protein bL17 | polymer | 122 | 13771.8 | 1 | UniProt (Q2FW33) Pfam (PF01196) | Staphylococcus aureus | 50S ribosomal protein L17 |
| 41 | OA (n) | Large ribosomal subunit protein uL18 | polymer | 119 | 13080.1 | 1 | UniProt (Q2FW22) Pfam (PF00861) | Staphylococcus aureus | 50S ribosomal protein L18 |
| 42 | PA (o) | Large ribosomal subunit protein bL19 | polymer | 116 | 13392.8 | 1 | UniProt (Q2FZ42) Pfam (PF01245) | Staphylococcus aureus | 50S ribosomal protein L19 |
| 43 | QA (p) | Large ribosomal subunit protein bL20 | polymer | 118 | 13720.3 | 1 | UniProt (Q2FXQ1) Pfam (PF00453) | Staphylococcus aureus | 50S ribosomal protein L20 |
| 44 | RA (q) | Large ribosomal subunit protein bL21 | polymer | 102 | 11354.1 | 1 | UniProt (Q2FXS8) Pfam (PF00829) | Staphylococcus aureus | 50S ribosomal protein L21 |
| 45 | SA (r) | Large ribosomal subunit protein uL22 | polymer | 117 | 12857.9 | 1 | UniProt (Q2FW11) Pfam (PF00237) | Staphylococcus aureus | 50S ribosomal protein L22 |
| 46 | TA (s) | Large ribosomal subunit protein uL23 | polymer | 91 | 10625.4 | 1 | UniProt (Q2FW08) Pfam (PF00276) | Staphylococcus aureus | 50S ribosomal protein L23 |
| 47 | UA (t) | Large ribosomal subunit protein uL24 | polymer | 105 | 11574.5 | 1 | UniProt (Q2FW17) Pfam (PF00467) Pfam (PF17136) | Staphylococcus aureus | 50S ribosomal protein L24 |
| 48 | VA (u) | Large ribosomal subunit protein bL25 | polymer | 217 | 23840.6 | 1 | UniProt (Q2G0S0) Pfam (PF01386) Pfam (PF14693) | Staphylococcus aureus | General stress protein CTC |
| 49 | WA (v) | Large ribosomal subunit protein bL27 | polymer | 94 | 10334.8 | 1 | UniProt (Q2FXT0) Pfam (PF01016) | Staphylococcus aureus | 50S ribosomal protein L27 |
| 50 | XA (w) | Large ribosomal subunit protein bL28 | polymer | 62 | 6995.3 | 1 | UniProt (Q2FZ60) Pfam (PF00830) | Staphylococcus aureus | 50S ribosomal protein L28 |
| 51 | YA (x) | Large ribosomal subunit protein uL29 | polymer | 69 | 8105.3 | 1 | UniProt (Q2FW14) Pfam (PF00831) | Staphylococcus aureus | 50S ribosomal protein L29 |
| 52 | ZA (y) | Large ribosomal subunit protein uL30 | polymer | 59 | 6565.7 | 1 | UniProt (P0A0G2) Pfam (PF00327) | Staphylococcus aureus | 50S ribosomal protein L30 |
| 53 | AB (z) | Large ribosomal subunit protein bL32 | polymer | 58 | 6657.8 | 1 | UniProt (Q2FZF1) Pfam (PF01783) | Staphylococcus aureus | 50S ribosomal protein L32 |
Sequence modifications
B: 1 - 255 (UniProt: Q2FZ25)
K: -8 - 120 (UniProt: Q2FW31)
L: 0 - 136 (UniProt: P0A0H0)
T: -1 - 81 (UniProt: Q2FXY6)
n: 1 - 119 (UniProt: Q2FW22)
t: 1 - 105 (UniProt: Q2FW17)
u: -1 - 215 (UniProt: Q2G0S0)
| PDB | External Database | Details |
|---|---|---|
| Ile 206 | Ala 206 | conflict |
| Ala 207 | Ile 207 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Lys 117 | Arg 126 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Arg 55 | Lys 56 | conflict |
| Arg 100 | Lys 101 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ser 80 | Asn 82 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ile 62 | Asp 62 | conflict |
| Ala 63 | Ile 63 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ala 53 | Glu 53 | conflict |
| Gln 54 | Gly 54 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Ser 161 | Gly 163 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2188381.1 | |
| All* | Total formula weight | 2188381.1 |
