9ROB
Crystal structure of human CD22 Ig domains 1-3 in complex with modified sialoside 1B
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | B-cell receptor CD22 | polymer | 324 | 36660.3 | 2 | UniProt (P20273) Pfam (PF08205) Pfam (PF13927) | Homo sapiens (human) | B-lymphocyte cell adhesion molecule,BL-CAM,Sialic acid-binding Ig-like lectin 2,Siglec-2,T-cell surface antigen Leu-14 |
| 2 | C, D (D, H) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 2 | In PDB GlyTouCan (G15407YE) | |||
| 3 | E, H (A, B) | (2R,4S,5R,6R)-5-acetamido-2-[[2,3-bis(chloranyl)phenyl]methoxy]-6-[(1R,2R)-1,2-bis(oxidanyl)-3-[(4-phenylphenyl)carbonylamino]propyl]-4-oxidanyl-oxane-2-carboxylic acid | non-polymer | 647.5 | 2 | Chemie (A1JJN) | |||
| 4 | F, G, I (A, B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 5 | J, K (A, B) | water | water | 18.0 | 19 | Chemie (HOH) |
Sequence modifications
A, B: 20 - 330 (UniProt: P20273)
| PDB | External Database | Details |
|---|---|---|
| Glu 17 | - | expression tag |
| Thr 18 | - | expression tag |
| Gly 19 | - | expression tag |
| Ala 67 | Asn 67 | engineered mutation |
| Ala 112 | Asn 112 | engineered mutation |
| Ala 135 | Asn 135 | engineered mutation |
| Ala 164 | Asn 164 | engineered mutation |
| Ala 231 | Asn 231 | engineered mutation |
| Gly 331 | - | expression tag |
| Gly 332 | - | expression tag |
| Thr 333 | - | expression tag |
| Lys 334 | - | expression tag |
| His 335 | - | expression tag |
| His 336 | - | expression tag |
| His 337 | - | expression tag |
| His 338 | - | expression tag |
| His 339 | - | expression tag |
| His 340 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 73320.6 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1173.1 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1571.3 | |
| All* | Total formula weight | 76065.0 |






