9RKI
Mixed model refinement of beta-2 Adrenergic receptor with photoazolol in dark state and Light state, 17 nanoseconds after light activation, recorded at LCLS
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Beta-2 adrenergic receptor,Endolysin | polymer | 442 | 50471.1 | 1 | UniProt (P07550) UniProt (P00720) Pfam (PF00001) Pfam (PF00959) | Homo sapiens (human) | Beta-2 adrenoreceptor,Beta-2 adrenoceptor,Lysis protein,Lysozyme,Muramidase |
| 2 | B, C, D, E, F... (A) | SULFATE ION | non-polymer | 96.1 | 7 | Chemie (SO4) | |||
| 3 | H (A) | ACETAMIDE | non-polymer | 59.1 | 1 | Chemie (ACM) | |||
| 4 | I, J, Y (A) | CHOLESTEROL | non-polymer | 386.7 | 3 | Chemie (CLR) PubChem (5997) | |||
| 5 | K (A) | PALMITIC ACID | non-polymer | 256.4 | 1 | Chemie (PLM) PubChem (985) | |||
| 6 | L, M, Q (A) | DODECAETHYLENE GLYCOL | non-polymer | 546.6 | 3 | Chemie (12P) PubChem (81248) | |||
| 7 | N, O, P, S, U... (A) | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | non-polymer | 356.5 | 7 | Chemie (OLC) PubChem (11451146) | |||
| 8 | AA, R (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 9 | T (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 10 | Z (A) | PENTAETHYLENE GLYCOL | non-polymer | 238.3 | 1 | Chemie (1PE) PubChem (62551) | |||
| 11 | BA (A) | ~{N}-[4-[(~{E})-[2-[(2~{S})-2-oxidanyl-3-(propan-2-ylamino)propoxy]phenyl]diazenyl]phenyl]ethanamide | non-polymer | 370.4 | 1 | Chemie (A1JHU) | |||
| 12 | CA (A) | water | water | 18.0 | 33 | Chemie (HOH) |
Sequence modifications
A: 29 - 230 (UniProt: P07550)
A: 1002 - 1161 (UniProt: P00720)
A: 263 - 342 (UniProt: P07550)
| PDB | External Database | Details |
|---|---|---|
| Trp 122 | Glu 122 | conflict |
| Glu 187 | Asn 187 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Gly 1012 | Arg 12 | conflict |
| Thr 1054 | Cys 54 | conflict |
| Ala 1097 | Cys 97 | conflict |
| Arg 1137 | Ile 137 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 50471.1 | |
| Non-Polymers* | Number of molecules | 27 |
| Total formula weight | 7108.6 | |
| All* | Total formula weight | 57579.6 |
