9REY
Sporosarcina pasteurii urease in complex with a hydrophilic derivative of Ebsulfur at 1.96 A
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Urease subunit gamma | polymer | 100 | 11134.9 | 1 | UniProt (P41022) | Sporosarcina pasteurii | Urea amidohydrolase subunit gamma |
| 2 | B (B) | Urease subunit beta | polymer | 122 | 13529.1 | 1 | UniProt (P41021) | Sporosarcina pasteurii | Urea amidohydrolase subunit beta |
| 3 | C (C) | Urease subunit alpha | polymer | 570 | 61607.7 | 1 | UniProt (P41020) Pfam (PF00449) Pfam (PF01979) | Sporosarcina pasteurii | Urea amidohydrolase subunit alpha |
| 4 | AA, BA, CA, D, DA... (C, A, B) | SULFATE ION | non-polymer | 96.1 | 24 | Chemie (SO4) | |||
| 5 | E, F, G, N, O... (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 19 | Chemie (EDO) | |||
| 6 | R, S (C) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) PubChem (934) | |||
| 7 | T (C) | HYDROXIDE ION | non-polymer | 17.0 | 1 | Chemie (OH) PubChem (961) | |||
| 8 | V (C) | CITRIC ACID | non-polymer | 192.1 | 1 | Chemie (CIT) PubChem (311) | |||
| 9 | W (C) | ~{tert}-butyl 2-[(2-sulfanylphenyl)carbonylamino]ethanoate | non-polymer | 267.3 | 1 | Chemie (A1JID) | |||
| 10 | ZA (C) | HYDROSULFURIC ACID | non-polymer | 34.1 | 1 | Chemie (H2S) PubChem (402) PubChem (5362487) | |||
| 11 | AB, BB, CB (A, B, C) | water | water | 18.0 | 546 | Chemie (HOH) |
Sequence modifications
A: 1 - 100 (UniProt: P41022)
C: 1 - 570 (UniProt: P41020)
| PDB | External Database | Details |
|---|---|---|
| Ala 20 | Leu 20 | variant |
| Lys 22 | Arg 22 | variant |
| PDB | External Database | Details |
|---|---|---|
| Tyr 35 | - | insertion |
| - | Val 42 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 86271.7 | |
| Non-Polymers* | Number of molecules | 49 |
| Total formula weight | 4112.7 | |
| All* | Total formula weight | 90384.4 |
