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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

9RDH

Structure of A16/G9 in complex with A56/K2 at pH 5.5 (vaccinia virus)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)		Virion membrane protein OPG143polymer34039111.01UniProt (P16710)
Pfam (PF03003)		Vaccinia virus Western Reserve
2B
(B)		Entry-fusion complex protein OPG094polymer31635601.91UniProt (P07611)
Pfam (PF03003)		Vaccinia virus Western ReserveEFC protein OPG094,Myristoylated protein G9,Protein F1
3C
(C)		Superinfection exclusion proteinpolymer41346738.91UniProt (P18384)
Pfam (PF00079)		Vaccinia virus Western ReserveProtein K2,Serine proteinase inhibitor 3
4D
(D)		Protein OPG185polymer13915592.01UniProt (Q01218)
Pfam (PF07686)		Vaccinia virus Western ReserveHemagglutinin
5E
(E)		alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.81In PDB
GlyTouCan (G94626GC)
6F
(F)		alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched367.31In PDB
GlyTouCan (G86851RC)
7G, H
(D)		2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
Sequence modifications
A: 3 - 295 (UniProt: P16710)
PDBExternal DatabaseDetails
Arg 0-expression tag
Ser 1-expression tag
Ala 2-expression tag
Gly 296-expression tag
Ser 297-expression tag
Gly 298-expression tag
Leu 299-expression tag
Val 300-expression tag
Pro 301-expression tag
Arg 302-expression tag
Gly 303-expression tag
Ser 304-expression tag
Gly 305-expression tag
Gly 306-expression tag
Ser 307-expression tag
Gly 308-expression tag
Gly 309-expression tag
Ser 310-expression tag
His 311-expression tag
His 312-expression tag
His 313-expression tag
His 314-expression tag
His 315-expression tag
His 316-expression tag
His 317-expression tag
His 318-expression tag
Gly 319-expression tag
Gly 320-expression tag
Ser 321-expression tag
Gly 322-expression tag
Thr 323-expression tag
Gly 324-expression tag
Gly 325-expression tag
Leu 326-expression tag
Asn 327-expression tag
Asp 328-expression tag
Ile 329-expression tag
Phe 330-expression tag
Glu 331-expression tag
Ala 332-expression tag
Gln 333-expression tag
Lys 334-expression tag
Ile 335-expression tag
Glu 336-expression tag
Trp 337-expression tag
His 338-expression tag
Glu 339-expression tag
B: 3 - 271 (UniProt: P07611)
PDBExternal DatabaseDetails
Ala 2-expression tag
Ala 82Asn 82conflict
Gln 93Asn 93conflict
Ala 156Ser 156conflict
Asp 157Asn 157conflict
Gly 272-expression tag
Ser 273-expression tag
Gly 274-expression tag
Leu 275-expression tag
Val 276-expression tag
Pro 277-expression tag
Arg 278-expression tag
Gly 279-expression tag
Ser 280-expression tag
Leu 281-expression tag
Glu 282-expression tag
Asp 283-expression tag
Asp 284-expression tag
Asp 285-expression tag
Asp 286-expression tag
Lys 287-expression tag
Ala 288-expression tag
Gly 289-expression tag
Trp 290-expression tag
Ser 291-expression tag
His 292-expression tag
Pro 293-expression tag
Gln 294-expression tag
Phe 295-expression tag
Glu 296-expression tag
Lys 297-expression tag
Gly 298-expression tag
Gly 299-expression tag
Gly 300-expression tag
Ser 301-expression tag
Gly 302-expression tag
Gly 303-expression tag
Gly 304-expression tag
Ser 305-expression tag
Gly 306-expression tag
Gly 307-expression tag
Gly 308-expression tag
Ser 309-expression tag
Trp 310-expression tag
Ser 311-expression tag
His 312-expression tag
Pro 313-expression tag
Gln 314-expression tag
Phe 315-expression tag
Glu 316-expression tag
Lys 317-expression tag
C: 16 - 369 (UniProt: P18384)
PDBExternal DatabaseDetails
Ser 109Cys 109conflict
Gly 370-expression tag
Ser 371-expression tag
Gly 372-expression tag
Leu 373-expression tag
Val 374-expression tag
Pro 375-expression tag
Arg 376-expression tag
Gly 377-expression tag
Ser 378-expression tag
Gly 379-expression tag
Ser 380-expression tag
Ala 381-expression tag
Gly 382-expression tag
Trp 383-expression tag
Ser 384-expression tag
His 385-expression tag
Pro 386-expression tag
Gln 387-expression tag
Phe 388-expression tag
Glu 389-expression tag
Lys 390-expression tag
Gly 391-expression tag
Gly 392-expression tag
Gly 393-expression tag
Ser 394-expression tag
Gly 395-expression tag
Gly 396-expression tag
Gly 397-expression tag
Ser 398-expression tag
Gly 399-expression tag
Gly 400-expression tag
Gly 401-expression tag
Ser 402-expression tag
Trp 403-expression tag
Ser 404-expression tag
His 405-expression tag
Pro 406-expression tag
Gln 407-expression tag
Phe 408-expression tag
Glu 409-expression tag
Lys 410-expression tag
Gly 411-expression tag
Thr 412-expression tag
Gly 413-expression tag
Gly 414-expression tag
Leu 415-expression tag
Asn 416-expression tag
Asp 417-expression tag
Ile 418-expression tag
Phe 419-expression tag
Glu 420-expression tag
Ala 421-expression tag
Gln 422-expression tag
Lys 423-expression tag
Ile 424-expression tag
Glu 425-expression tag
Trp 426-expression tag
His 427-expression tag
Glu 428-expression tag
D: 17 - 133 (UniProt: Q01218)
PDBExternal DatabaseDetails
Arg 15-expression tag
Ser 16-expression tag
Gly 134-expression tag
Ser 135-expression tag
Gly 136-expression tag
Leu 137-expression tag
Val 138-expression tag
Pro 139-expression tag
Arg 140-expression tag
Gly 141-expression tag
Ser 142-expression tag
Gly 143-expression tag
Ser 144-expression tag
Gly 145-expression tag
His 146-expression tag
His 147-expression tag
His 148-expression tag
His 149-expression tag
His 150-expression tag
His 151-expression tag
His 152-expression tag
His 153-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight137043.8
BranchedNumber of molecules2
Total formula weight1278.2
Non-Polymers*Number of molecules2
Total formula weight442.4
All*Total formula weight138764.4
*Water molecules are not included.

246704

PDB entries from 2025-12-24

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