9RA3
Crystal structure of the transpeptidase LdtMt2 from Mycobacterium tuberculosis in complex with alkene C1
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | L,D-transpeptidase 2 | polymer | 355 | 38009.1 | 2 | UniProt (O53223) Pfam (PF17964) Pfam (PF03734) | Mycobacterium tuberculosis | LDT 2,Ldt(Mt2) |
| 2 | C, O (A, B) | 1-ethylisoquinoline | non-polymer | 157.2 | 2 | Chemie (A1JDX) | |||
| 3 | D (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) PubChem (753) | |||
| 4 | E, J, R (A, B) | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 3 | Chemie (DMS) PubChem (679) | |||
| 5 | F, G, P, Q, V (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 6 | H, I, K, L, S... (A, B) | NITRATE ION | non-polymer | 62.0 | 9 | Chemie (NO3) PubChem (943) | |||
| 7 | M, Y (A, B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) PubChem (923) | |||
| 8 | N, Z (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) PubChem (312) | |||
| 9 | AA, BA (A, B) | water | water | 18.0 | 224 | Chemie (HOH) |
Sequence modifications
A, B: 56 - 408 (UniProt: O53223)
| PDB | External Database | Details |
|---|---|---|
| Gln 54 | - | expression tag |
| Ser 55 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 76018.3 | |
| Non-Polymers* | Number of molecules | 24 |
| Total formula weight | 1626.2 | |
| All* | Total formula weight | 77644.5 |
