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9R8Q

Structure of thrombin bound to BAY 3389934

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(L)
Prothrombinpolymer293432.81UniProt (P00734)
Pfam (PF09396)
Homo sapiens (human)Coagulation factor II
2B
(H)
Prothrombinpolymer25929780.21UniProt (P00734)
Pfam (PF00089)
Homo sapiens (human)Coagulation factor II
3C
(I)
Hirudin-2polymer111420.51UniProt (P28504)
UniProt (by SIFTS) (P09945)
Hirudo medicinalis (medicinal leech)Hirudin II
4D
(H)
2-(1-methylimidazol-2-yl)ethyl (2~{S})-3-[(5-chloranylthiophen-2-yl)carbonylamino]-2-[[2-ethyl-3-[(3~{S})-3-oxidanyl-2-oxidanylidene-pyrrolidin-1-yl]phenyl]sulfonylamino]propanoatenon-polymer624.11Chemie (A1JDJ)
5E
(H)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
6F, G, J
(H)
GLYCEROLnon-polymer92.13Chemie (GOL)
7H, I, K, L
(H)
DIMETHYL SULFOXIDEnon-polymer78.14Chemie (DMS)
8M, N, O
(L, H, I)
waterwater18.0223Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight34633.5
Non-Polymers*Number of molecules9
Total formula weight1434.2
All*Total formula weight36067.7
*Water molecules are not included.

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PDB entries from 2026-01-28

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