9R6R

Local refinement of the N-terminal domain (NTD) from the Porcine hemagglutinating encephalomyelitis virus (PHEV) Spike in the open conformation bound to 9-O-Ac-Sia

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Spike glycoprotein	polymer	1333	147884.8	1	UniProt (Q2QKN3) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601)	Porcine hemagglutinating encephalomyelitis virus	S glycoprotein,E2,Peplomer protein
2	B, C (D, B)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	branched		424.4	2	In PDB GlyTouCan (G42666HT)
3	D (A)	2-acetamido-2-deoxy-beta-D-glucopyranose	non-polymer		221.2	1	Chemie (NAG)
4	E (A)	9-O-acetyl-5-acetamido-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranosonic acid	non-polymer		351.3	1	Chemie (5N6)

Sequence modifications

A: 15 - 1274 (UniProt: Q2QKN3)

PDB	External Database	Details
Gly 1275	-	expression tag
Ser 1276	-	expression tag
Gly 1277	-	expression tag
Tyr 1278	-	expression tag
Ile 1279	-	expression tag
Pro 1280	-	expression tag
Glu 1281	-	expression tag
Ala 1282	-	expression tag
Pro 1283	-	expression tag
Arg 1284	-	expression tag
Asp 1285	-	expression tag
Gly 1286	-	expression tag
Gln 1287	-	expression tag
Ala 1288	-	expression tag
Tyr 1289	-	expression tag
Val 1290	-	expression tag
Arg 1291	-	expression tag
Lys 1292	-	expression tag
Asp 1293	-	expression tag
Gly 1294	-	expression tag
Glu 1295	-	expression tag
Trp 1296	-	expression tag
Val 1297	-	expression tag
Leu 1298	-	expression tag
Leu 1299	-	expression tag
Ser 1300	-	expression tag
Thr 1301	-	expression tag
Phe 1302	-	expression tag
Leu 1303	-	expression tag
Gly 1304	-	expression tag
Ser 1305	-	expression tag
Leu 1306	-	expression tag
Val 1307	-	expression tag
Pro 1308	-	expression tag
Arg 1309	-	expression tag
Gly 1310	-	expression tag
Ser 1311	-	expression tag
His 1312	-	expression tag
His 1313	-	expression tag
His 1314	-	expression tag
His 1315	-	expression tag
His 1316	-	expression tag
His 1317	-	expression tag
His 1318	-	expression tag
His 1319	-	expression tag
Ser 1320	-	expression tag
Ala 1321	-	expression tag
Trp 1322	-	expression tag
Ser 1323	-	expression tag
His 1324	-	expression tag
Pro 1325	-	expression tag
Gln 1326	-	expression tag
Phe 1327	-	expression tag
Glu 1328	-	expression tag
Lys 1329	-	expression tag
Gly 1330	-	expression tag
Thr 1331	-	expression tag
Gly 1332	-	expression tag
Gly 1333	-	expression tag
Leu 1334	-	expression tag
Asn 1335	-	expression tag
Asp 1336	-	expression tag
Ile 1337	-	expression tag
Phe 1338	-	expression tag
Glu 1339	-	expression tag
Ala 1340	-	expression tag
Gln 1341	-	expression tag
Lys 1342	-	expression tag
Ile 1343	-	expression tag
Glu 1344	-	expression tag
Trp 1345	-	expression tag
His 1346	-	expression tag
Glu 1347	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	147884.8
Branched	Number of molecules	2
	Total formula weight	848.8
Non-Polymers*	Number of molecules	2
	Total formula weight	572.5
All*	Total formula weight	149306.1

*Water molecules are not included.