9R3L

Structure of liver pyruvate kinase in complex with fluorescent probe 4d

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D, E... (A, B, C, D, E...)	Isoform L-type of Pyruvate kinase PKLR	polymer	447	48285.4	8	UniProt (P30613) Pfam (PF00224) Pfam (PF02887)	Homo sapiens (human)	Pyruvate kinase 1,Pyruvate kinase isozymes L/R,R-type/L-type pyruvate kinase,Red cell/liver pyruvate kinase
2	BA, HA, I, MA, N... (F, G, A, H, B...)	OXALATE ION	non-polymer		88.0	8	Chemie (OXL)
3	CA, GA, J, LA (F, G, A, H)	4-[4-[[7-(azetidin-1-yl)-2,1,3-benzoxadiazol-4-yl]sulfonyl]piperazin-1-yl]sulfonylbenzene-1,2-diol	non-polymer		495.5	4	Chemie (A1JB0)
4	DA, IA, K, NA, O... (F, G, A, H, B...)	1,6-di-O-phosphono-beta-D-fructofuranose	non-polymer		340.1	8	Chemie (FBP)
5	AA, EA, JA, L, M... (E, F, G, A, B...)	MAGNESIUM ION	non-polymer		24.3	8	Chemie (MG)
6	FA, KA, U, V (F, G, C)	POTASSIUM ION	non-polymer		39.1	4	Chemie (K)
7	OA, PA, QA, RA, SA... (A, B, C, D, E...)	water	water		18.0	582	Chemie (HOH)

Sequence modifications

A, B, C, D, E, F, G, H: 1 - 543 (UniProt: P30613)

PDB	External Database	Details
Gly -1	-	expression tag
Ser 0	-	expression tag
Asp 12	Ser 12	conflict
-	Glu 130	deletion
-	Ile 131	deletion
-	Arg 132	deletion
-	Thr 133	deletion
-	Gly 134	deletion
-	Ile 135	deletion
-	Leu 136	deletion
-	Gln 137	deletion
-	Gly 138	deletion
-	Gly 139	deletion
-	Pro 140	deletion
-	Glu 141	deletion
-	Ser 142	deletion
-	Glu 143	deletion
-	Val 144	deletion
-	Glu 145	deletion
-	Leu 146	deletion
-	Val 147	deletion
-	Lys 148	deletion
-	Gly 149	deletion
-	Ser 150	deletion
-	Gln 151	deletion
-	Val 152	deletion
-	Leu 153	deletion
-	Val 154	deletion
-	Thr 155	deletion
-	Val 156	deletion
-	Asp 157	deletion
-	Pro 158	deletion
-	Ala 159	deletion
-	Phe 160	deletion
-	Arg 161	deletion
-	Thr 162	deletion
-	Arg 163	deletion
-	Gly 164	deletion
-	Asn 165	deletion
-	Ala 166	deletion
-	Asn 167	deletion
-	Thr 168	deletion
-	Val 169	deletion
-	Trp 170	deletion
-	Val 171	deletion
-	Asp 172	deletion
-	Tyr 173	deletion
-	Pro 174	deletion
-	Asn 175	deletion
-	Ile 176	deletion
-	Val 177	deletion
-	Arg 178	deletion
-	Val 179	deletion
-	Val 180	deletion
-	Pro 181	deletion
-	Val 182	deletion
-	Gly 183	deletion
-	Gly 184	deletion
-	Arg 185	deletion
-	Ile 186	deletion
-	Tyr 187	deletion
-	Ile 188	deletion
-	Asp 189	deletion
-	Asp 190	deletion
-	Gly 191	deletion
-	Leu 192	deletion
-	Ile 193	deletion
-	Ser 194	deletion
-	Leu 195	deletion
-	Val 196	deletion
-	Val 197	deletion
-	Gln 198	deletion
-	Lys 199	deletion
-	Ile 200	deletion
-	Gly 201	deletion
-	Pro 202	deletion
-	Glu 203	deletion
-	Gly 204	deletion
-	Leu 205	deletion
-	Val 206	deletion
-	Thr 207	deletion
-	Gln 208	deletion
-	Val 209	deletion
-	Glu 210	deletion
-	Asn 211	deletion
-	Gly 212	deletion
-	Gly 213	deletion
-	Val 214	deletion
-	Leu 215	deletion
-	Gly 216	deletion
-	Ser 217	deletion
-	Arg 218	deletion
-	Lys 219	deletion
-	Gly 220	deletion
-	Val 221	deletion
-	Asn 222	deletion
-	Leu 223	deletion
-	Pro 224	deletion
-	Gly 225	deletion
-	Ala 226	deletion
-	Gln 227	deletion
Gly 130	Val 228	linker
Ser 229	Asp 229	linker
Gly 230	Leu 230	linker

Contents of the asymmetric unit

Polymers	Number of chains	8
	Total formula weight	386283.0
Non-Polymers*	Number of molecules	32
	Total formula weight	5758.0
All*	Total formula weight	392041.1

*Water molecules are not included.