9R24
Cryo-EM structure of Acinetobacter baumannii LolDF bound abaucin (narrow cavity)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (C, D) | Lipoprotein-releasing system transmembrane subunit LolC | polymer | 411 | 44644.3 | 2 | UniProt (A0A241ZGK9) | Acinetobacter baumannii | |
| 2 | C, D (A, B) | Lipoprotein-releasing system ATP-binding protein LolD | polymer | 224 | 24734.3 | 2 | UniProt (A0A219CAN2) | Acinetobacter baumannii | |
| 3 | E, F (C, D) | 1'-[2-[4-(trifluoromethyl)phenyl]ethyl]spiro[1~{H}-3,1-benzoxazine-4,4'-piperidine]-2-one | non-polymer | 390.4 | 2 | Chemie (R6Q) PubChem (10000456) | |||
| 4 | G, I (A, B) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 2 | Chemie (ATP) | |||
| 5 | H, J (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) PubChem (888) |
Sequence modifications
C, D: 16 - 425 (UniProt: A0A241ZGK9)
A, B: 3 - 226 (UniProt: A0A219CAN2)
| PDB | External Database | Details |
|---|---|---|
| Gly 76 | - | insertion |
| Asp 253 | Tyr 238 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Glu 170 | Ala 170 | conflict |
| Ala 172 | Glu 172 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 138757.2 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1843.8 | |
| All* | Total formula weight | 140601.0 |
