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9QQP

Mouse Ribosome rotated-2 PRE state

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A1)
Large ribosomal subunit protein uL30polymer27031492.91UniProt (P14148)
Pfam (PF08079)
Pfam (PF00327)
Mus musculus (house mouse)60S ribosomal protein L7
2B
(A2)
28S ribosomal RNApolymer36151171994.91Mus musculus
3C
(A3)
Small ribosomal subunit protein uS13polymer15217759.81UniProt (P62270)
Pfam (PF00416)
Mus musculus (house mouse)40S ribosomal protein S18,Ke-3,Ke3
4D
(B1)
Large ribosomal subunit protein eL8polymer26630042.71UniProt (P12970)
Pfam (PF01248)
Mus musculus (house mouse)60S ribosomal protein L7a,Surfeit locus protein 3
5E
(B2)
5S ribosomal RNApolymer12138998.11Mus musculus
6F
(B3)
40S ribosomal protein S19 (eS19)polymer14516091.61Mus musculus
7G
(Bv)
transfer RNApolymer7624484.61Mus musculus
8H
(Bx)
messenger RNApolymer103016.71Mus musculus
9I
(By)
Nascent protein chainpolymer221890.31Mus musculus
10J
(C1)
Large ribosomal subunit protein uL6polymer19221917.51UniProt (P51410)
Pfam (PF00347)
Mus musculus (house mouse)60S ribosomal protein L9
11K
(C2)
5.8S ribosomal RNApolymer15650157.71GenBank (1756494520)Mus musculus (house mouse)
12L
(C3)
Small ribosomal subunit protein uS10polymer11913398.81UniProt (P60867)
Pfam (PF00338)
Mus musculus (house mouse)40S ribosomal protein S20
13M
(D1)
Large ribosomal subunit protein uL16polymer21424657.11UniProt (Q6ZWV3)
Pfam (PF00252)
Mus musculus (house mouse)60S ribosomal protein L10,Protein QM homolog,Ribosomal protein L10
14N
(D2)
Large ribosomal subunit protein uL2polymer25728088.91UniProt (P62918)
Pfam (PF00181)
Pfam (PF03947)
Mus musculus (house mouse)60S ribosomal protein L8
15O
(D3)
40S ribosomal protein S21 (eS21)polymer839124.41Mus musculus
16P
(E1)
Large ribosomal subunit protein uL5polymer17820288.51UniProt (Q9CXW4)
Pfam (PF00281)
Pfam (PF00673)
Mus musculus (house mouse)60S ribosomal protein L11
17Q
(E2)
Large ribosomal subunit protein uL3polymer40346212.11UniProt (P27659)
Pfam (PF00297)
Mus musculus (house mouse)60S ribosomal protein L3,J1 protein
18R
(E3)
Small ribosomal subunit protein uS12polymer14315844.71UniProt (P62267)
Pfam (PF00164)
Mus musculus (house mouse)40S ribosomal protein S23
19S
(F1)
Large ribosomal subunit protein eL13polymer21124364.71UniProt (P47963)
Pfam (PF01294)
Mus musculus (house mouse)60S ribosomal protein L13,A52
20T
(F2)
Large ribosomal subunit protein uL4polymer41947259.91UniProt (Q9D8E6)
Pfam (PF00573)
Pfam (PF14374)
Mus musculus (house mouse)60S ribosomal protein L4
21U
(F3)
Small ribosomal subunit protein eS26polymer11512987.51UniProt (P62855)
Pfam (PF01283)
Mus musculus (house mouse)40S ribosomal protein S26
22V
(G1)
Large ribosomal subunit protein eL14polymer21723620.31UniProt (Q9CR57)
Pfam (PF01929)
Mus musculus (house mouse)60S ribosomal protein L14
23W
(G2)
Large ribosomal subunit protein uL18polymer29734464.81UniProt (P47962)
Pfam (PF17144)
Pfam (PF14204)
Mus musculus (house mouse)60S ribosomal protein L5
24X
(G3)
Small ribosomal subunit protein eS28polymer697855.11UniProt (P62858)
Pfam (PF01200)
Mus musculus (house mouse)40S ribosomal protein S28
25Y
(H1)
Large ribosomal subunit protein eL15polymer20424207.31UniProt (Q9CZM2)
Pfam (PF00827)
Mus musculus (house mouse)60S ribosomal protein L15
26Z
(H2)
Large ribosomal subunit protein eL6polymer29633593.91UniProt (P47911)
Pfam (PF03868)
Pfam (PF01159)
Mus musculus (house mouse)60S ribosomal protein L6,TAX-responsive enhancer element-binding protein 107,TAXREB107
27AA
(H3)
Small ribosomal subunit protein uS14polymer566690.81UniProt (P62274)
Pfam (PF00253)
Mus musculus (house mouse)40S ribosomal protein S29
28BA
(I2)
Large ribosomal subunit protein uL13polymer20323519.41UniProt (P19253)
Pfam (PF00572)
Mus musculus (house mouse)60S ribosomal protein L13a,Transplantation antigen P198,Tum-P198 antigen
29CA
(I3)
Small ribosomal subunit protein RACK1polymer31735115.71UniProt (P68040)
Pfam (PF00400)
Mus musculus (house mouse)12-3,Guanine nucleotide-binding protein subunit beta-2-like 1,Receptor for activated C kinase,Receptor of activated protein C kinase 1,Receptor of activated protein kinase C 1,p205
30DA
(J2)
Large ribosomal subunit protein uL22polymer18421444.21UniProt (Q9CPR4)
Pfam (PF00237)
Mus musculus (house mouse)60S ribosomal protein L17
31EA
(J3)
Small ribosomal subunit protein uS5polymer29331301.41UniProt (P25444)
Pfam (PF00333)
Pfam (PF03719)
Mus musculus (house mouse)40S ribosomal protein S2,40S ribosomal protein S4,Protein LLRep3
32FA
(K2)
Large ribosomal subunit protein eL18polymer18821698.71UniProt (P35980)
Pfam (PF17135)
Mus musculus (house mouse)60S ribosomal protein L18
33GA
(K3)
Small ribosomal subunit protein eS6polymer24928751.91UniProt (P62754)
Pfam (PF01092)
Mus musculus (house mouse)40S ribosomal protein S6,Phosphoprotein NP33
34HA
(L2)
Large ribosomal subunit protein eL19polymer19623535.31UniProt (P84099)
Pfam (PF01280)
Pfam (PF25476)
Mus musculus (house mouse)60S ribosomal protein L19
35IA
(L3)
Small ribosomal subunit protein uS4polymer19422641.61UniProt (Q6ZWN5)
Pfam (PF00163)
Pfam (PF01479)
Mus musculus (house mouse)40S ribosomal protein S9
36JA
(M2)
Large ribosomal subunit protein eL20polymer17620778.51UniProt (P62717)
Pfam (PF01775)
Mus musculus (house mouse)60S ribosomal protein L18a
37KA
(M3)
Small ribosomal subunit protein eS12polymer13214539.01UniProt (P63323)
Pfam (PF01248)
Mus musculus (house mouse)40S ribosomal protein S12
38LA
(N2)
Large ribosomal subunit protein eL21polymer16018624.01UniProt (O09167)
Pfam (PF01157)
Mus musculus (house mouse)60S ribosomal protein L21
39MA
(N3)
Small ribosomal subunit protein uS15polymer15117259.41UniProt (P62301)
Pfam (PF08069)
Pfam (PF00312)
Mus musculus (house mouse)40S ribosomal protein S13
40NA
(O2)
Large ribosomal subunit protein eL22polymer12814785.01UniProt (P67984)
Pfam (PF01776)
Mus musculus (house mouse)60S ribosomal protein L22,Heparin-binding protein HBp15
41OA
(O3)
Small ribosomal subunit protein uS11polymer15116302.81UniProt (P62264)
Pfam (PF00411)
Mus musculus (house mouse)40S ribosomal protein S14
42PA
(P2)
Large ribosomal subunit protein uL14polymer14014892.51UniProt (P62830)
Pfam (PF00238)
Mus musculus (house mouse)60S ribosomal protein L23
43QA
(P3)
Small ribosomal subunit protein uS8polymer13014865.61UniProt (P62245)
Pfam (PF00410)
Mus musculus (house mouse)40S ribosomal protein S15a
44RA
(Q2)
Large ribosomal subunit protein eL24polymer15717825.11UniProt (Q8BP67)
Pfam (PF01246)
Mus musculus (house mouse)60S ribosomal protein L24
45SA
(Q3)
Small ribosomal subunit protein eS24polymer13315463.31UniProt (P62849)
Pfam (PF01282)
Mus musculus (house mouse)40S ribosomal protein S24
46TA
(R2)
Large ribosomal subunit protein uL23polymer15617740.21UniProt (P62751)
Pfam (PF03939)
Pfam (PF00276)
Mus musculus (house mouse)60S ribosomal protein L23a
47UA
(R3)
Small ribosomal subunit protein eS25polymer12513776.21UniProt (P62852)
Pfam (PF03297)
Mus musculus (house mouse)40S ribosomal protein S25
48VA
(S2)
Large ribosomal subunit protein uL24polymer14517303.41UniProt (P61255)
Pfam (PF16906)
Pfam (PF00467)
Mus musculus (house mouse)60S ribosomal protein L26,Silica-induced gene 20 protein,SIG-20
49WA
(S3)
Small ribosomal subunit protein eS27polymer849480.21UniProt (Q6ZWU9)
Pfam (PF01667)
Mus musculus (house mouse)40S ribosomal protein S27
50XA
(T2)
Large ribosomal subunit protein eL27polymer13615835.81UniProt (P61358)
Pfam (PF00467)
Pfam (PF01777)
Mus musculus (house mouse)60S ribosomal protein L27
51YA
(T3)
Ubiquitin-like FUBI-ribosomal protein eS30 fusion proteinpolymer13314411.61UniProt (P62862)
Pfam (PF00240)
Pfam (PF04758)
Mus musculus (house mouse)FAU ubiquitin-like and ribosomal protein S30
52ZA
(U2)
Large ribosomal subunit protein uL15polymer14816648.61UniProt (P14115)
Pfam (PF00828)
Mus musculus (house mouse)60S ribosomal protein L27a,L29
53AB
(V2)
Large ribosomal subunit protein eL29polymer16017635.21UniProt (P47915)
Pfam (PF01779)
Mus musculus (house mouse)60S ribosomal protein L29
54BB
(W2)
Large ribosomal subunit protein eL30polymer11512805.11UniProt (P62889)
Pfam (PF01248)
Mus musculus (house mouse)60S ribosomal protein L30
55CB
(X2)
Large ribosomal subunit protein eL31polymer12514494.91UniProt (P62900)
Pfam (PF01198)
Mus musculus (house mouse)60S ribosomal protein L31
56DB
(Y2)
Large ribosomal subunit protein eL32polymer13515898.91UniProt (P62911)
Pfam (PF01655)
Mus musculus (house mouse)60S ribosomal protein L32
57EB
(Z2)
Large ribosomal subunit protein eL33polymer11012580.81UniProt (O55142)
Pfam (PF01247)
Mus musculus (house mouse)60S ribosomal protein L35a
58FB
(a2)
Large ribosomal subunit protein eL34polymer11713325.01UniProt (Q9D1R9)
Pfam (PF01199)
Mus musculus (house mouse)60S ribosomal protein L34
59GB
(b2)
Large ribosomal subunit protein uL29polymer12314595.71UniProt (Q6ZWV7)
Pfam (PF00831)
Mus musculus (house mouse)60S ribosomal protein L35
60HB
(c2)
Large ribosomal subunit protein eL36polymer10512290.91UniProt (P47964)
Pfam (PF01158)
Mus musculus (house mouse)60S ribosomal protein L36
61IB
(d2)
Large ribosomal subunit protein eL37polymer9711111.01UniProt (Q9D823)
Pfam (PF01907)
Mus musculus (house mouse)60S ribosomal protein L37
62JB
(e2)
Large ribosomal subunit protein eL38polymer708224.91UniProt (Q9JJI8)
Pfam (PF01781)
Mus musculus (house mouse)60S ribosomal protein L38
63KB
(f2)
Large ribosomal subunit protein eL39polymer516426.81UniProt (P62892)
Pfam (PF00832)
Mus musculus (house mouse)60S ribosomal protein L39
64LB
(g2)
Ubiquitin-ribosomal protein eL40 fusion proteinpolymer12814758.41UniProt (P62984)
Pfam (PF00240)
Pfam (PF01020)
Mus musculus (house mouse)Ubiquitin A-52 residue ribosomal protein fusion product 1
65MB
(h2)
60S ribosomal protein L41polymer253473.51UniProt (P62947)
Pfam (PF05162)
Mus musculus (house mouse)
66NB
(i2)
Large ribosomal subunit protein eL42polymer10612477.01UniProt (P83882)
Pfam (PF00935)
Mus musculus (house mouse)60S ribosomal protein L36a,60S ribosomal protein L44
67OB
(j2)
Large ribosomal subunit protein eL43polymer9210299.41UniProt (P61514)
Pfam (PF01780)
Mus musculus (house mouse)60S ribosomal protein L37a
68PB
(k2)
Large ribosomal subunit protein eL28polymer13715770.61UniProt (P41105)
Pfam (PF01778)
Mus musculus (house mouse)60S ribosomal protein L28
69QB
(m2)
18S ribosomal RNApolymer1635528171.31Mus musculus
70RB
(n2)
transfer RNApolymer7323596.11Mus musculus (house mouse)
71SB
(o2)
Small ribosomal subunit protein uS2polymer29532867.91UniProt (P14206)
Pfam (PF00318)
Pfam (PF16122)
Mus musculus (house mouse)37 kDa laminin receptor precursor,37LRP,37 kDa oncofetal antigen,37/67 kDa laminin receptor,LRP/LR,40S ribosomal protein SA,67 kDa laminin receptor,67LR,Laminin receptor 1,LamR,Laminin-binding protein precursor p40,LBP/p40,OFA/iLRP
72TB
(p2)
40S ribosomal protein S3apolymer26429942.01UniProt (P97351)
Pfam (PF01015)
Mus musculus (house mouse)Protein TU-11
73UB
(q2)
Small ribosomal subunit protein uS3polymer24326729.41UniProt (P62908)
Pfam (PF07650)
Pfam (PF00189)
Mus musculus (house mouse)40S ribosomal protein S3
74VB
(r2)
40S ribosomal protein S4, X isoform (eS4)polymer25728893.01Mus musculus
75WB
(s2)
Small ribosomal subunit protein uS7polymer20422913.51UniProt (P97461)
Pfam (PF00177)
Mus musculus (house mouse)40S ribosomal protein S5
76XB
(t2)
Small ribosomal subunit protein eS7polymer19422168.91UniProt (P62082)
Pfam (PF01251)
Mus musculus (house mouse)40S ribosomal protein S7
77YB
(u2)
Small ribosomal subunit protein eS8polymer20824263.41UniProt (P62242)
Pfam (PF01201)
Mus musculus (house mouse)40S ribosomal protein S8
78ZB
(v2)
Small ribosomal subunit protein eS10polymer16518951.81UniProt (P63325)
Pfam (PF03501)
Mus musculus (house mouse)40S ribosomal protein S10
79AC
(w2)
Small ribosomal subunit protein uS17polymer15818468.81UniProt (P62281)
Pfam (PF16205)
Pfam (PF00366)
Mus musculus (house mouse)40S ribosomal protein S11
80BC
(x2)
Small ribosomal subunit protein uS19polymer14517076.21UniProt (P62843)
Pfam (PF00203)
Mus musculus (house mouse)40S ribosomal protein S15,RIG protein
81CC
(y2)
Small ribosomal subunit protein uS9polymer14616477.41UniProt (P14131)
Pfam (PF00380)
Mus musculus (house mouse)40S ribosomal protein S16
82DC
(z2)
Small ribosomal subunit protein eS17polymer13515552.11UniProt (P63276)
Pfam (PF00833)
Mus musculus (house mouse)40S ribosomal protein S17
83AD, AE, AF, AG, AH...
(A2, m2, E3, H1, J2...)
MAGNESIUM IONnon-polymer24.3123Chemie (MG)
PubChem (888)
84KF, MF, RF, SF, TF...
(F3, H3, d2, g2, i2...)
ZINC IONnon-polymer65.46Chemie (ZN)
PubChem (32051)
85DH
(B1)
waterwater18.01Chemie (HOH)
Sequence modifications
F3: 1 - 115 (UniProt: P62855)
PDBExternal DatabaseDetails
Pro 102Arg 102conflict
J3: 1 - 293 (UniProt: P25444)
PDBExternal DatabaseDetails
Met 61Ile 61conflict
T3: -73 - 70 (UniProt: P62862)
PDBExternal DatabaseDetails
Pro 55Asn 118conflict
Asn 56Val 119conflict
Ala 57Val 120conflict
q2: 1 - 243 (UniProt: P62908)
PDBExternal DatabaseDetails
Thr 195Ser 195conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains82
Total formula weight3281284.4
Non-Polymers*Number of molecules129
Total formula weight3382.0
All*Total formula weight3284666.3
*Water molecules are not included.

254587

PDB entries from 2026-06-03

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