9QLH
YerA41 family-A DNA polymerase in complex with a DNA duplex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA polymerase | polymer | 1306 | 152801.8 | 1 | UniProt (A0AA86MGY1) | Escherichia coli 'BL21-Gold(DE3)pLysS AG' | |
| 2 | B (P) | DNA (25-MER) | polymer | 29 | 8913.8 | 1 | DNA molecule | ||
| 3 | C (T) | DNA (29-MER) | polymer | 39 | 11920.6 | 1 | DNA molecule | ||
| 4 | D (A) | 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | non-polymer | 491.2 | 1 | Chemie (DG3) | |||
| 5 | E (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) |
Sequence modifications
A: 1 - 1306 (UniProt: A0AA86MGY1)
| PDB | External Database | Details |
|---|---|---|
| Ala 231 | Asp 231 | conflict |
| Ala 233 | Glu 233 | conflict |
| Thr 402 | Ile 402 | conflict |
| Asp 420 | - | insertion |
| Ile 533 | Val 532 | conflict |
| Ser 595 | Asn 594 | conflict |
| Lys 647 | Arg 646 | conflict |
| Glu 673 | Gly 672 | conflict |
| Leu 717 | Val 716 | conflict |
| Glu 761 | Asp 760 | conflict |
| Val 915 | Ala 914 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 173636.2 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 515.5 | |
| All* | Total formula weight | 174151.7 |
