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9QJ3

Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and iodide at pH 5.5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(B, D)
Myeloperoxidase heavy chainpolymer46753321.32UniProt (P05164)
Pfam (PF03098)
Homo sapiens (human)
2C, D
(A, C)
Myeloperoxidase light chainpolymer11412894.52UniProt (P05164)Homo sapiens (human)
3E, F
(E, F)
Myeloperoxidase inhibitor SPINpolymer606922.72UniProt (Q2G0X2)Staphylococcus aureus
4G, H, J, K
(G, H, J, K)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.44In PDB
GlyTouCan (G42666HT)
5I
(I)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched1098.01In PDB
6L
(L)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched1057.01In PDB
GlyTouCan (G82348BZ)
7AA, AB, AC, AD, BA...
(B, D, F, A, C...)
IODIDE IONnon-polymer126.989Chemie (IOD)
8BB, KC
(B, D)
CALCIUM IONnon-polymer40.12Chemie (CA)
9CB, LC
(D, A)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.52Chemie (HEM)
10BD, CD, DD, ED, FD...
(B, D, A, C, E...)
waterwater18.0273Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight146276.9
BranchedNumber of molecules6
Total formula weight3852.6
Non-Polymers*Number of molecules93
Total formula weight12607.6
All*Total formula weight162737.1
*Water molecules are not included.

246031

PDB entries from 2025-12-10

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